Gene_Locus Report
Biblio print
Add to basket
Go to basket
Tree Display
AceDB Schema
XML Display
Feedback

Gene_locus Report for: metma-q8pw23

Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 JCM 11833 / OCM 88) (Methanosarcina frisia) Putative uncharacterized protein

Relationship
Family|DLH-S
Block| X
Position in NCBI Life Tree|Methanosarcina mazei
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Archaea: N E > Euryarchaeota: N E > Methanomicrobia: N E > Methanosarcinales: N E > Methanosarcinaceae: N E > Methanosarcina: N E > Methanosarcina mazei: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AE008384
1 UniProt : Q8PW23
1 UniProt : Q8PW23
1 Interpro : Q8PW23
1 Pfam : Q8PW23
1 PIRSF : Q8PW23
1 SUPERFAM : Q8PW23
Sequence
Peptide
Graphical view for this peptide sequence: metma-q8pw23
Colored MSA for DLH-S (raw) 
MNSSSDNYKRDIEVRIPVDSINLEGNLNIPEGARGIVIFVHGSGSSRHSP
RNQYVADELRRAGLGTLLFDLLTIEEERIDMMTRHLRFDIELLSKRLIDV
TGWVLNRPETRGLNIGYFGASTGAAAALIAAKEYATAVKAVVSRGGRPDL
AESALIHVKAPTLLIVGGKDIQVIDLNKWALERIVALDKELKIVPGATHL
FEEPGALEEVARLAGKWFTRYLADGV
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA
MNSSSDNYKRDIEVRIPVDSINLEGNLNIPEGARGIVIFVHGSGSSRHSP
RNQYVADELRRAGLGTLLFDLLTIEEERIDMMTRHLRFDIELLSKRLIDV
TGWVLNRPETRGLNIGYFGASTGAAAALIAAKEYATAVKAVVSRGGRPDL
AESALIHVKAPTLLIVGGKDIQVIDLNKWALERIVALDKELKIVPGATHL
FEEPGALEEVARLAGKWFTRYLADGV

Reference
    Title: The genome of Methanosarcina mazei: evidence for lateral gene transfer between Bacteria and Archaea.
    Deppenmeier U, Johann A, Hartsch T, Merkl R, Martinez-Arias R, Henne A, Wiezer A, Baeumer S, Brueggemann H and Fritz H-J <7 more author(s)>
    Ref: J Mol Microbiol Biotechnol, 4:453, 2002 : PubMed

            


Other Papers

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer