Gene_Locus Report

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Gene_locus Report for: metpp-a2slp5

Methylibium petroleiphilum, Methylibium sp., Hydrolase or acyltransferase-like protein

Comment
Other strains: Methylibium petroleiphilum (strain PM1), Methylibium sp. (T29; T29-B) only c-term Pfam A Abhydrolase_6 185 416


Relationship
Family|Carboxymethylbutenolide_lactonase
Block| X
Position in NCBI Life Tree|Methylibium petroleiphilum
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Betaproteobacteria: N E > Burkholderiales: N E > unclassified Burkholderiales: N E > Burkholderiales Genera incertae sedis: N E > Methylibium: N E > Methylibium petroleiphilum: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : CP000555, AZSN01000226, AZND01000277
3 UniProt : A2SLP5, W7WCW3, W7VZR7
3 UniProt : A2SLP5, W7WCW3, W7VZR7
3 Interpro : A2SLP5, W7WCW3, W7VZR7
3 Pfam : A2SLP5, W7WCW3, W7VZR7
3 PIRSF : A2SLP5, W7WCW3, W7VZR7
3 SUPERFAM : A2SLP5, W7WCW3, W7VZR7
Sequence
Graphical view for this peptide sequence: metpp-a2slp5
Colored MSA for Carboxymethylbutenolide_lactonase (raw)
FRSAGTPALHYTVREPRSKASPRSTVVLSHALGCDVSLWDALANALAAEH
RVICYDHRGHGDSEAPAGPYTMAELADDAERLLAELDTGPVVWIGLSLGG
MVGQELALRHPRRVEALVIANSSAGFDEAGRNAWQQRIDAVAQGGVDAVA
DAAMQRWFTTDFRSAQPATVARWRRRVASTSARGYVAASQAVMRHDTAAR
LPQISAPTLVIAGALDPGTPVAMSQAIADAVPRARLVVLDDAAHLSVLEQ
PAAFTAVVHDFLAALA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

FRSAGTPALHYTVREPRSKASPRSTVVLSHALGCDVSLWDALANALAAEH
RVICYDHRGHGDSEAPAGPYTMAELADDAERLLAELDTGPVVWIGLSLGG
MVGQELALRHPRRVEALVIANSSAGFDEAGRNAWQQRIDAVAQGGVDAVA
DAAMQRWFTTDFRSAQPATVARWRRRVASTSARGYVAASQAVMRHDTAAR
LPQISAPTLVIAGALDPGTPVAMSQAIADAVPRARLVVLDDAAHLSVLEQ
PAAFTAVVHDFLAALA


Reference
    Title: Whole-genome analysis of the methyl tert-butyl ether-degrading beta-proteobacterium Methylibium petroleiphilum PM1
    Kane SR, Chakicherla AY, Chain PS, Schmidt R, Shin MW, Legler TC, Scow KM, Larimer FW, Lucas SM and Hristova KR <1 more author(s)>
    Ref: Journal of Bacteriology, 189:1931, 2007 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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