Gene_locus Report for: metsb-b8ekf2 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906). Uncharacterized protein
Comment
only central Pfam A DUF2235 154 452 Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Rhizobiales: N E > Beijerinckiaceae: N E > Methylocella: N E > Methylocella silvestris: N E 6_AlphaBeta_hydrolase :
metsb-b8eip1 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Alpha/beta hydrolase fold protein ,
metsb-b8epc3 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Alpha/beta hydrolase fold protein ,
metsb-b8erq3 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Putative uncharacterized protein ,
metsb-b8es03 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Alpha/beta hydrolase fold protein ,
metsb-b8esy8 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Putative uncharacterized protein .
AcoC_BiotinLipoyl-ABH :
metsb-b8ejc1 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Alpha/beta hydrolase fold protein .
Bacterial_esterase :
metsb-b8enz1 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Putative uncharacterized protein ,
metsb-b8ep68 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Putative uncharacterized protein ,
metsb-b8ep69 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Putative uncharacterized protein ,
metsb-b8eps6 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Putative uncharacterized protein ,
metsb-b8er81 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Putative uncharacterized protein ,
metsb-b8esk6 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Putative uncharacterized protein .
BD-FAE :
metsb-b8epw2 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Esterase/lipase/thioesterase family protein .
Carbon-carbon_bond_hydrolase :
metsb-b8est9 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Alpha/beta hydrolase fold protein .
Carb_B_Bacteria :
metsb-b8eij0 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Carboxylesterase type B ,
metsb-b8eiz2 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Carboxylesterase type B ,
metsb-b8ep67 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Carboxylesterase type B ,
metsb-b8er80 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Carboxylesterase type B ,
metsb-b8es64 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Carboxylesterase type B .
DLH-S :
metsb-b8ejb4 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Erythromycin esterase .
Duf_900 :
metsb-b8ei37 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Putative uncharacterized protein ,
metsb-b8ell6 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Putative uncharacterized protein ,
metsb-b8elq0 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Putative uncharacterized protein .
Duf_3141 :
metsb-b8eis0 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Putative uncharacterized protein ,
metsb-b8eqs6 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Putative uncharacterized protein ,
metsb-b8ern6 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) PHB de-polymerase domain protein ,
metsb-b8ert2 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Putative uncharacterized protein .
Haloacetate_dehalogenase :
metsb-b8eqc0 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Alpha/beta hydrolase fold protein .
Haloperoxidase :
metsb-b8eix8 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Alpha/beta hydrolase fold protein .
Mg-chelatase_BchO :
metsb-b8eq01 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906). Magnesium chelatase accessory protein .
Monoglyceridelipase_lysophospholip :
metsb-b8emt1 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Alpha/beta hydrolase fold protein .
UCP037442 :
metsb-b8eps3 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Alpha/beta hydrolase Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: metsb-b8ekf2 Colored MSA for Duf_2235 (raw)
RRIVILCDGTSNRPDDKEEGESAATNIWKLSEALKSDDTQTVWYQPGVGT
DTSSTAKAARRTQNLLSITGAAAVTKITAMGGAVIKLVESAAGVGISEAI
LNGYSEIVRQYQPGDRIYLIGFSRGAFAARCIAGVISRCGLLRADYLYYA
PDVVQIYRSRAHPLDKIYLREDMAYPAAENAKPGATAGAVKVEFLGVFDT
VASLGFPLWGYWFRVLPIWNNSNFSASPAKACKAVYHALSMDERRSQFFP
MLFEKPSTPSDDDPALTQMWFRGAHGDIGGGYGRHEVSDVALEWMMDAMS
RHGLSFREEAAAGVKPDPLGR
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
R R I V I L C D G T S N R P D D K E E G E S A A T N I W K L S E A L K S D D T Q T V W Y Q P G V G T D T S S T A K A A R R T Q N L L S I T G A A A V T K I T A M G G A V I K L V E S A A G V G I S E A I L N G Y S E I V R Q Y Q P G D R I Y L I G F S R G A F A A R C I A G V I S R C G L L R A D Y L Y Y A P D V V Q I Y R S R A H P L D K I Y L R E D M A Y P A A E N A K P G A T A G A V K V E F L G V F D T V A S L G F P L W G Y W F R V L P I W N N S N F S A S P A K A C K A V Y H A L S M D E R R S Q F F P M L F E K P S T P S D D D P A L T Q M W F R G A H G D I G G G Y G R H E V S D V A L E W M M D A M S R H G L S F R E E A A A G V K P D P L G R
Reference
Title: Complete genome sequence of the aerobic facultative methanotroph Methylocella silvestris BL2Chen Y , Crombie A , Rahman MT , Dedysh SN , Liesack W , Stott MB , Alam M , Theisen AR , Murrell JC , Dunfield PF Ref: Journal of Bacteriology, 192 :3840, 2010 : PubMed Abstract ESTHER: Chen_2010_J.Bacteriol_192_3840 PubMedSearch: Chen 2010 J.Bacteriol 192 3840 PubMedID: 20472789 Gene_locus related to this paper: metsb-b8ekf2 ,
metsb-b8eq01 Abstract
Methylocella silvestris BL2 is an aerobic methanotroph originally isolated from an acidic forest soil in Germany. It is the first fully authenticated facultative methanotroph. It grows not only on methane and other one-carbon (C(1)) substrates, but also on some compounds containing carbon-carbon bonds, such as acetate, pyruvate, propane, and succinate. Here we report the full genome sequence of this bacterium.
Other Papers
