Gene_locus Report for: mizye-a0a210pul3 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase
Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Lophotrochozoa: N E > Mollusca: N E > Bivalvia: N E > Pteriomorphia: N E > Pectinoida: N E > Pectinoidea: N E > Pectinidae: N E > Mizuhopecten: N E > Mizuhopecten yessoensis: N E A85-EsteraseD-FGH :
mizye-a0a210pwl7 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). S-formylglutathione hydrolase .
ABHD8 :
mizye-a0a210q332 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Abhydrolase domain-containing protein 8 .
ABHD12-PHARC :
mizye-a0a210qyk8 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Oxidized phosphatidylserine lipase ABHD12 .
ABHD13-BEM46 :
mizye-a0a210pij5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Alpha/beta hydrolase domain-containing protein 13 .
abh_upf0017 :
mizye-a0a210pqn0 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Abhydrolase domain-containing protein 15 ,
mizye-a0a210q7t5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Abhydrolase domain-containing protein 15 .
ACHE :
mizye-a0a210qls6 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Acetylcholinesterase PYE-5989.14.1 ,
mizye-a0a210qis3 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Acetylcholinesterase PYE-7021.7 ,
mizye-a0a210qg00 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Acetylcholinesterase PYE-7653.1 .
Carb_B_Mollusca :
mizye-a0a210pu25 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase PYE-10985.38 ,
mizye-a0a210pek1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210pum3 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210ptr6 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase PYE-110997.15 ,
mizye-a0a210ptq5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210ptc4.1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylesterase 1C(1) two genes concatened ,
mizye-a0a210ptc4.2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylesterase 1C(1) two genes concatened ,
mizye-a0a210ptv1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase PYE-110997.9 ,
mizye-a0a210ptv7 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210qgl6 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210qg90 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210ptq0 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase PYE-110997.11 ,
mizye-a0a210qg72 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210ptb1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210pjd3 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210qg92 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210q8v2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210qg93 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210q160.1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase (two genes concatened) ,
mizye-a0a210q160.2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase (two genes concatened) ,
mizye-a0a210qes4 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210pk25 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210q1b8 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210q110 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Liver carboxylesterase 2 ,
mizye-a0a210r503 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-P021348901.1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase LOC110447492 isoform X1 ,
mizye-P021348901.2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase LOC110447492 isoform X1 PYE-3431.12 .
Neuroligin :
mizye-a0a210r5n9 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis).Neuroligin PYE-431.60 ,
mizye-a0a210qbv2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Neuroligin PYE-8469.10 .
PAF-Acetylhydrolase :
mizye-a0a210q8u5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). 1-alkyl-2-acetylglycerophosphocholine esterase .
Pancreatic_lipase :
mizye-a0a210ped6 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Pancreatic triacylglycerol lipase ,
mizye-a0a210q4h5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Inactive pancreatic lipase-related protein 1 ,
mizye-a0a210q4h9 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Inactive pancreatic lipase-related protein 1 ,
mizye-a0a210q4j1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Inactive pancreatic lipase-related protein 1 ,
mizye-a0a210qf86 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Pancreatic lipase-related protein 2 Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: mizye-a0a210pul3 Colored MSA for Carb_B_Mollusca (raw)
MATILSHMLLMTIPVIVIGQNNPTVRTRMGEVRGILENNVNQFRNIPYAK
PPVGPLRFAKSVPSDPWTTVRDGTQFGPSCLQPPYPETDKFLPNLNKSED
CLYLNVYVPGSVVAGSNKPVMVWIHGGAFLVGQAMLYDASFLAKTGDVIV
VTVNYRLGVFGFLSTMDSILPGNYGLWDQRLALQWVKTNIAEFGGNPSSV
TLFGESAGSISVSLQSINPMNRGLFQRVIAESGVSLSNIAVWDNSSSFAR
DVGVSLNCSSTTGKLDDAYVRCMRSIPAAKLLNTQNVALFMQSDNFGPVL
HPIIGPVIDHTLITDSPYKLLSNTSSPSFQFFRSLDYMAGNVNQEGSLFL
ERLAKIGKSKNFDFKTGVPTSVFCNYLVPIFTATFEAVSSRTISPASACS
TYGRSDVAAQASSVLDCFADVNFVVPAIESLGIHSAGNILTSTYQYMFNR
PSIDTPSLQSLPHWFVGAPHASEVFFLFGAQELKSKFNITVSAADMALSQ
RMMTHWTNFAKIGNPNMNNNPMWIPYDISQRFYMDFNSNVTLKSHLYKAR
VSLWLGDQSDLLSALQSVIVGRGTE
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
M A T I L S H M L L M T I P V I V I G Q N N P T V R T R M G E V R G I L E N N V N Q F R N I P Y A K P P V G P L R F A K S V P S D P W T T V R D G T Q F G P S C L Q P P Y P E T D K F L P N L N K S E D C L Y L N V Y V P G S V V A G S N K P V M V W I H G G A F L V G Q A M L Y D A S F L A K T G D V I V V T V N Y R L G V F G F L S T M D S I L P G N Y G L W D Q R L A L Q W V K T N I A E F G G N P S S V T L F G E S A G S I S V S L Q S I N P M N R G L F Q R V I A E S G V S L S N I A V W D N S S S F A R D V G V S L N C S S T T G K L D D A Y V R C M R S I P A A K L L N T Q N V A L F M Q S D N F G P V L H P I I G P V I D H T L I T D S P Y K L L S N T S S P S F Q F F R S L D Y M A G N V N Q E G S L F L E R L A K I G K S K N F D F K T G V P T S V F C N Y L V P I F T A T F E A V S S R T I S P A S A C S T Y G R S D V A A Q A S S V L D C F A D V N F V V P A I E S L G I H S A G N I L T S T Y Q Y M F N R P S I D T P S L Q S L P H W F V G A P H A S E V F F L F G A Q E L K S K F N I T V S A A D M A L S Q R M M T H W T N F A K I G N P N M N N N P M W I P Y D I S Q R F Y M D F N S N V T L K S H L Y K A R V S L W L G D Q S D L L S A L Q S V I V G R G T E
Reference
Title: Scallop genome provides insights into evolution of bilaterian karyotype and developmentWang S , Zhang J , Jiao W , Li J , Xun X , Sun Y , Guo X , Huan P , Dong B and Bao Z <42 more author(s)> Wang S , Zhang J , Jiao W , Li J , Xun X , Sun Y , Guo X , Huan P , Dong B , Zhang L , Hu X , Sun X , Wang J , Zhao C , Wang Y , Wang D , Huang X , Wang R , Lv J , Li Y , Zhang Z , Liu B , Lu W , Hui Y , Liang J , Zhou Z , Hou R , Li X , Liu Y , Li H , Ning X , Lin Y , Zhao L , Xing Q , Dou J , Mao J , Guo H , Dou H , Li T , Mu C , Jiang W , Fu Q , Fu X , Miao Y , Liu J , Yu Q , Li R , Liao H , Kong Y , Jiang Z , Chourrout D , Bao Z (- 42) Ref: Nat Ecol Evol, 1 :120, 2017 : PubMed Abstract ESTHER: Wang_2017_Nat.Ecol.Evol_1_120 PubMedSearch: Wang 2017 Nat.Ecol.Evol 1 120 PubMedID: 28812685 Gene_locus related to this paper: mizye-a0a210qls6 ,
mizye-a0a210qis3 ,
mizye-a0a210qg00 ,
mizye-a0a210ped6 ,
mizye-a0a210q4h5 ,
mizye-a0a210q4h9 ,
mizye-a0a210q4j1 ,
mizye-a0a210qf86 ,
mizye-a0a210q332 ,
mizye-a0a210pqn0 ,
mizye-a0a210q7t5 ,
mizye-a0a210pij5 ,
mizye-a0a210qyk8 ,
mizye-a0a210pwl7 ,
mizye-a0a210q8u5 ,
mizye-a0a210r5n9 ,
mizye-a0a210qbv2 ,
mizye-a0a210pu25 ,
mizye-a0a210pek1 ,
mizye-a0a210pul3 ,
mizye-a0a210pum3 ,
mizye-a0a210ptr6 ,
mizye-a0a210ptq5 ,
mizye-a0a210ptc4.1 ,
mizye-a0a210ptc4.2 ,
mizye-a0a210ptv1 ,
mizye-a0a210ptv7 ,
mizye-a0a210qgl6 ,
mizye-a0a210qg90 ,
mizye-a0a210ptq0 ,
mizye-a0a210qg72 ,
mizye-a0a210ptb1 ,
mizye-a0a210pjd3 ,
mizye-a0a210qg92 ,
mizye-a0a210q8v2 ,
mizye-a0a210qg93 ,
mizye-a0a210q160.1 ,
mizye-a0a210q160.2 ,
mizye-a0a210qes4 ,
mizye-a0a210pk25 ,
mizye-a0a210q1b8 ,
mizye-a0a210q110 ,
mizye-a0a210r503 ,
mizye-P021348901.1 ,
mizye-P021348901.2 Abstract
Reconstructing the genomes of bilaterian ancestors is central to our understanding of animal evolution, where knowledge from ancient and/or slow-evolving bilaterian lineages is critical. Here we report a high-quality, chromosome-anchored reference genome for the scallop Patinopecten yessoensis, a bivalve mollusc that has a slow-evolving genome with many ancestral features. Chromosome-based macrosynteny analysis reveals a striking correspondence between the 19 scallop chromosomes and the 17 presumed ancestral bilaterian linkage groups at a level of conservation previously unseen, suggesting that the scallop may have a karyotype close to that of the bilaterian ancestor. Scallop Hox gene expression follows a new mode of subcluster temporal co-linearity that is possibly ancestral and may provide great potential in supporting diverse bilaterian body plans. Transcriptome analysis of scallop mantle eyes finds unexpected diversity in phototransduction cascades and a potentially ancient Pax2/5/8-dependent pathway for noncephalic eyes. The outstanding preservation of ancestral karyotype and developmental control makes the scallop genome a valuable resource for understanding early bilaterian evolution and biology.
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