mycle-PKS13

 
Mycobacterium leprae polyketide synthase

Relationship
Block X
Mycobacterium leprae position in NCBI Life Tree :
N link to NCBI taxonomic web page and E link to ESTHER gene locus found in this strain.
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Corynebacteriales: N E > Mycobacteriaceae: N E > Mycobacterium: N E > Mycobacterium leprae: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic



1 Genbank : AL583917
1 UniProtTrembl : Q9CDB1
1 Interpro : Q9CDB1
1 Prodom : Q9CDB1
1 Pfam : Q9CDB1
1 PIRSF : Q9CDB1
1 SUPERFAM : Q9CDB1
1 QuickSwissBlast : Q9CDB1
 
Sequence
Graphical view for this peptide sequence: mycle-PKS13
Colored MSA for Thioesterase (raw)
VPVFVFHPAGGSTVVYEPLLKRLPADTPMYGFERVEGSIEERVAVYVPKL
IEMQGDGPYILAGWSLGGVLAYACAIGLRSAGKEVAWVGLIDAVRAGEEI
PQTKEEIRKRWDRYARFAERTFNVTVPEIPYEQLEELDDEGQVRFVLDVV
SQSGVQIPAGIIDHQRTSYLDNRAIDTAQIQPYDGHVTLYMADRYHDDAI
MFEPRYAVRKPDGGWGEYVSDLEVVPIGGEHIQAIDEPIIAKVGEHMSQA
LNKIEAEQKAPK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

VPVFVFHPAGGSTVVYEPLLKRLPADTPMYGFERVEGSIEERVAVYVPKL
IEMQGDGPYILAGWSLGGVLAYACAIGLRSAGKEVAWVGLIDAVRAGEEI
PQTKEEIRKRWDRYARFAERTFNVTVPEIPYEQLEELDDEGQVRFVLDVV
SQSGVQIPAGIIDHQRTSYLDNRAIDTAQIQPYDGHVTLYMADRYHDDAI
MFEPRYAVRKPDGGWGEYVSDLEVVPIGGEHIQAIDEPIIAKVGEHMSQA
LNKIEAEQKAPK

no DNA




Reference
    Title: Massive gene decay in the leprosy bacillus
    Cole ST, Eiglmeier K, Parkhill J, James KD, Thomson NR, Wheeler PR, Honore N, Garnier T, Churcher C and Barrell BG <34 more author(s)>
    Ref: Nature, 409:1007, 2001 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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