Gene_Locus Report

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Gene_locus Report for: mycsh-a0a1e3tiq5

Mycobacterium shimoidei Uncharacterized protein

Relationship
Family|Abhydrolase_9
Block| X
Position in NCBI Life Tree|Mycobacterium shimoidei
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Corynebacteriales: N E > Mycobacteriaceae: N E > Mycobacterium: N E > Mycobacterium shimoidei: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : WP_069395783
Sequence
Graphical view for this peptide sequence: mycsh-a0a1e3tiq5
Colored MSA for Abhydrolase_9 (raw)
MTVRDAPGRHPLLVWAWSLLRLKYVGIAFGALFFCLSLTPSLLPRDWIFQ
GLVGGINAAFGYGLGVVIGKVVHRLVLRSAGWWPPPPRILLLMKAAVVVA
SPAACVLMLIPAASWQRQVSALMGIPGPTAPAYLRTLLVAAGVGALLVGA
SRVLIDAIKVLARMLIRRWRIHNETAMFIGTAIVVTVLVLLINGVLVRGF
FAAANAIFEPQNSETRPGLTQPTLPEKSGSPASLAPWDSLGYQGRSFVAT
GPHAADITRINGRPAREPIRIYAGLHTADDDEGRMKVLVRELERTGASDR
KMLVIVPTTGTGWINPVAARAIEMMYDGDTAIVGAQYSYLPSWISFLADQ
QKSMDAGRMLVDSIHHYWEQLPRDHRPKLVLYGESLGSMAGQSAFDFLPD
IPRMGFDAVLWVGPPHESPLWHALIERRDPHSTQVQPRYDNGRTVRFSEA
VTPHDVTRTAAPPWDGTRVLFLQHPSDPVVWWSPRLLFTRPDWLVEPPGQ
DRTAAMSWYPVVTFWQVSADLTEAEDMPGGHGHNYGDIVLDGWVAVAPPD
GWQPSDTERIRVALKQTASADEPKD
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTVRDAPGRHPLLVWAWSLLRLKYVGIAFGALFFCLSLTPSLLPRDWIFQ
GLVGGINAAFGYGLGVVIGKVVHRLVLRSAGWWPPPPRILLLMKAAVVVA
SPAACVLMLIPAASWQRQVSALMGIPGPTAPAYLRTLLVAAGVGALLVGA
SRVLIDAIKVLARMLIRRWRIHNETAMFIGTAIVVTVLVLLINGVLVRGF
FAAANAIFEPQNSETRPGLTQPTLPEKSGSPASLAPWDSLGYQGRSFVAT
GPHAADITRINGRPAREPIRIYAGLHTADDDEGRMKVLVRELERTGASDR
KMLVIVPTTGTGWINPVAARAIEMMYDGDTAIVGAQYSYLPSWISFLADQ
QKSMDAGRMLVDSIHHYWEQLPRDHRPKLVLYGESLGSMAGQSAFDFLPD
IPRMGFDAVLWVGPPHESPLWHALIERRDPHSTQVQPRYDNGRTVRFSEA
VTPHDVTRTAAPPWDGTRVLFLQHPSDPVVWWSPRLLFTRPDWLVEPPGQ
DRTAAMSWYPVVTFWQVSADLTEAEDMPGGHGHNYGDIVLDGWVAVAPPD
GWQPSDTERIRVALKQTASADEPKD



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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