myctu-RV1215C

 
Mycobacterium tuberculosis, Mycobacterium bovis hypothetical 62.6 kda protein (diester hydrolase, putative) RV1215C

Comment
There are more than 3000 strains. Other Uniprot entries and list of strains can be found with the link: Other strains


Relationship
Block X
Mycobacterium tuberculosis position in NCBI Life Tree :
N link to NCBI taxonomic web page and E link to ESTHER gene locus found in this strain.
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Corynebacteriales: N E > Mycobacteriaceae: N E > Mycobacterium: N E > Mycobacterium tuberculosis complex: N E > Mycobacterium tuberculosis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic



>3 Genbank links 2 more: BX248338, BX842575, AE000516
2 UniProt : O05316, A5U1R3
2 UniProtTrembl : O05316, A5U1R3
2 Interpro : O05316, A5U1R3
2 Prodom : O05316, A5U1R3
2 Pfam : O05316, A5U1R3
2 PIRSF : O05316, A5U1R3
2 SUPERFAM : O05316, A5U1R3
2 QuickSwissBlast : O05316, A5U1R3
 
Sequence
Graphical view for this peptide sequence: myctu-RV1215C
Colored MSA for Cocaine_esterase (raw)
MARNPSPALDRPWRRPGALRYALERVRGVAKPPITVTDPPADVVIERDVE
VPTRDGTLLRINVFRSAEGGARPVIASIHPYGKDALPRRRGNRWTFSPQY
RMLRQPKPLTFSALTGWEAPDPAWWTAQGFVVVNADSRGCGRSDGTGDLL
SHQEAEDTYDLVGWLADQAWSDGRVVMLGVSYLAISQYAVAALQPPALRA
ICPWEGFTDAYRDLAFPGGIRESGFTRLWSRGVRRRTRQTYDMEQMQEAH
PLRDDFWRSRVPDLSAIKVPMLVCGSFSDNNLHSRGSIRAFTRSGCGHAR
LYTHRGGKWETFYSATALSEQLKFLRDALAGSSGSRSVRLEVREDRDTIT
AVREETQWPLAGTRWRPMYLAGPGLLATEPPPTAGSIRFQTRSRAAAFNW
TIPEDIELTGPMAARLWVQLDGCDDANLFVGVEKWRDGQFVAFEGSYGWG
RDRVTTGWQRVSLRELDPELSQPWEPVPACARPRPVTAGEVVAVDVALGP
SATLFRAGEQLRLVVGGRWLSPRNPLTGQFPAAYPRPPRGRVTLHWGPRY
DAHLLIPEVPG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MARNPSPALDRPWRRPGALRYALERVRGVAKPPITVTDPPADVVIERDVE
VPTRDGTLLRINVFRSAEGGARPVIASIHPYGKDALPRRRGNRWTFSPQY
RMLRQPKPLTFSALTGWEAPDPAWWTAQGFVVVNADSRGCGRSDGTGDLL
SHQEAEDTYDLVGWLADQAWSDGRVVMLGVSYLAISQYAVAALQPPALRA
ICPWEGFTDAYRDLAFPGGIRESGFTRLWSRGVRRRTRQTYDMEQMQEAH
PLRDDFWRSRVPDLSAIKVPMLVCGSFSDNNLHSRGSIRAFTRSGCGHAR
LYTHRGGKWETFYSATALSEQLKFLRDALAGSSGSRSVRLEVREDRDTIT
AVREETQWPLAGTRWRPMYLAGPGLLATEPPPTAGSIRFQTRSRAAAFNW
TIPEDIELTGPMAARLWVQLDGCDDANLFVGVEKWRDGQFVAFEGSYGWG
RDRVTTGWQRVSLRELDPELSQPWEPVPACARPRPVTAGEVVAVDVALGP
SATLFRAGEQLRLVVGGRWLSPRNPLTGQFPAAYPRPPRGRVTLHWGPRY
DAHLLIPEVPG

no DNA




References
24 more
    Title: The complete genome sequence of Mycobacterium bovis
    Garnier T, Eiglmeier K, Camus JC, Medina N, Mansoor H, Pryor M, Duthoy S, Grondin S, Lacroix C and Hewinson RG <12 more author(s)>
    Ref: Proc Natl Acad Sci U S A, 100:7877, 2003 : PubMed

            

    Title: Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains
    Fleischmann RD, Alland D, Eisen JA, Carpenter L, White O, Peterson J, Deboy R, Dodson R, Gwinn M and Fraser CM <16 more author(s)>
    Ref: Journal of Bacteriology, 184:5479, 2002 : PubMed

            

    Title: Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
    Cole ST, Brosch R, Parkhill J, Garnier T, Churcher C, Harris D, Gordon SV, Eiglmeier K, Gas S and Barrell BG <32 more author(s)>
    Ref: Nature, 393:537, 1998 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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