myctu-Rv1800

 
Mycobacterium tuberculosis, Mycobacterium bovis, PPE family protein Rv1800

Comment
There are more than 1000 strains. Other Uniprot entries and list of strains can be found with the link: Other strains


Relationship
Family PE-PPE
Block X
Mycobacterium tuberculosis position in NCBI Life Tree :
N link to NCBI taxonomic web page and E link to ESTHER gene locus found in this strain.
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Corynebacteriales: N E > Mycobacteriaceae: N E > Mycobacterium: N E > Mycobacterium tuberculosis complex: N E > Mycobacterium tuberculosis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic



>3 Genbank links 14 more: DS016976, CP000717, BX842577
3 UniProt : P9WI10, P9WI11, A5U3G7
3 UniProtTrembl : P9WI11, P9WI10, A5U3G7
3 Interpro : P9WI11, P9WI10, A5U3G7
3 Prodom : P9WI11, P9WI10, A5U3G7
3 Pfam : P9WI11, P9WI10, A5U3G7
3 PIRSF : P9WI11, P9WI10, A5U3G7
3 SUPERFAM : P9WI11, P9WI10, A5U3G7
3 QuickSwissBlast : P9WI11, P9WI10, A5U3G7
 
Sequence
Graphical view for this peptide sequence: myctu-Rv1800
Colored MSA for PE-PPE (raw)
MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSV
TSGLVVGWWQGSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFE
EALAATVHPAMVAANRAQVASLVASNLFGQNAPAIAALESLYECMWAQDV
AAMAGYYVGASAVATQLASWLQRLQSIPGAASLDARLPSSAEAPMGVVRA
VNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYMSGSVPGVIAQ
ALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS
QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFP
SLGVTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYV
HSNYFILTPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVG
NPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIAD
ALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPLSIDSL
IDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE
GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDI
SAIVP
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSV
TSGLVVGWWQGSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFE
EALAATVHPAMVAANRAQVASLVASNLFGQNAPAIAALESLYECMWAQDV
AAMAGYYVGASAVATQLASWLQRLQSIPGAASLDARLPSSAEAPMGVVRA
VNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYMSGSVPGVIAQ
ALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS
QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFP
SLGVTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYV
HSNYFILTPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVG
NPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIAD
ALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPLSIDSL
IDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE
GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDI
SAIVP

no DNA




References
4 more
    Title: Whole genome sequence analysis of Mycobacterium bovis bacillus Calmette-Guerin (BCG) Tokyo 172: a comparative study of BCG vaccine substrains
    Seki M, Honda I, Fujita I, Yano I, Yamamoto S, Koyama A
    Ref: Vaccine, 27:1710, 2009 : PubMed

            

    Title: Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains
    Fleischmann RD, Alland D, Eisen JA, Carpenter L, White O, Peterson J, Deboy R, Dodson R, Gwinn M and Fraser CM <16 more author(s)>
    Ref: Journal of Bacteriology, 184:5479, 2002 : PubMed

            

    Title: Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
    Cole ST, Brosch R, Parkhill J, Garnier T, Churcher C, Harris D, Gordon SV, Eiglmeier K, Gas S and Barrell BG <32 more author(s)>
    Ref: Nature, 393:537, 1998 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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