myctu-Y1834

 
Mycobacterium tuberculosis; Mycobacterium bovis, Putative hydrolase YI34 Rv1834 MT1882

Comment
There are more than 3000 strains. Other Uniprot entries and list of strains can be found with the link: Other strains ancien Swiss prot Y0D9_MYCTU, mycobacterium tuberculosis Q50599 and Mycobacterium bovis Q7TW47


Relationship
Family MEST-like
Block X
Mycobacterium tuberculosis position in NCBI Life Tree :
N link to NCBI taxonomic web page and E link to ESTHER gene locus found in this strain.
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Corynebacteriales: N E > Mycobacteriaceae: N E > Mycobacterium: N E > Mycobacterium tuberculosis complex: N E > Mycobacterium tuberculosis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic



>3 Genbank links 32 more: Z78020, BX248346, BX248340
>3 UniProt links 3 more: A1KJP6, C1APB1, C6DR48
1 Ncbi-nid : 3261625
1 Ncbi-pid : 1483537
3 UniProtTrembl : P9WLR0, P9WLR1, A5U3K1
3 Interpro : P9WLR0, P9WLR1, A5U3K1
3 Prodom : P9WLR0, P9WLR1, A5U3K1
3 Pfam : P9WLR0, P9WLR1, A5U3K1
3 PIRSF : P9WLR0, P9WLR1, A5U3K1
3 SUPERFAM : P9WLR0, P9WLR1, A5U3K1
3 QuickSwissBlast : P9WLR0, P9WLR1, A5U3K1
 
Sequence
Graphical view for this peptide sequence: myctu-Y1834
Colored MSA for MEST-like (raw)
MTSPSVREWRDGGRWLPTAVGKVFVRSGPGDTPTMLLLHGYPSSSFDFRA
VIPHLTGQAWVTMDFLGFGLSDKPRPHRYSLLEQAHLVETVVAHTVTGAV
VVLAHDMGTSVTTELLARDLDGRLPFDLRRAVLSNGSVILERASLRPIQK
VLRSPLGPVAARLVSRGGFTRGFGRIFSPAHPLSAQEAQAQWELLCYNDG
NRIPHLLISYLDERIRHAQRWHGAVRDWPKPLGFVWGLDDPVATTNVLNG
LRELRPSAAVVELPGLGHYPQVEAPKAYAEAALSLLVD
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTSPSVREWRDGGRWLPTAVGKVFVRSGPGDTPTMLLLHGYPSSSFDFRA
VIPHLTGQAWVTMDFLGFGLSDKPRPHRYSLLEQAHLVETVVAHTVTGAV
VVLAHDMGTSVTTELLARDLDGRLPFDLRRAVLSNGSVILERASLRPIQK
VLRSPLGPVAARLVSRGGFTRGFGRIFSPAHPLSAQEAQAQWELLCYNDG
NRIPHLLISYLDERIRHAQRWHGAVRDWPKPLGFVWGLDDPVATTNVLNG
LRELRPSAAVVELPGLGHYPQVEAPKAYAEAALSLLVD

Graphical view for this nucleotide DNA sequence (1921 bp): myctu-Y1834



References
3 more
    Title: The complete genome sequence of Mycobacterium bovis
    Garnier T, Eiglmeier K, Camus JC, Medina N, Mansoor H, Pryor M, Duthoy S, Grondin S, Lacroix C and Hewinson RG <12 more author(s)>
    Ref: Proc Natl Acad Sci U S A, 100:7877, 2003 : PubMed

            

    Title: Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains
    Fleischmann RD, Alland D, Eisen JA, Carpenter L, White O, Peterson J, Deboy R, Dodson R, Gwinn M and Fraser CM <16 more author(s)>
    Ref: Journal of Bacteriology, 184:5479, 2002 : PubMed

            

    Title: Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
    Cole ST, Brosch R, Parkhill J, Garnier T, Churcher C, Harris D, Gordon SV, Eiglmeier K, Gas S and Barrell BG <32 more author(s)>
    Ref: Nature, 393:537, 1998 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
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