Gene_Locus Report

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Gene_locus Report for: neofi-a1d0b8

Neosartorya fischeri (Aspergillus fischerianus); Neosartorya fumigata (Aspergillus fumigatus). Histone deacetylase hda1 Arb2 domain

Comment
Other strains: Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) (Aspergillus fischerianus); Neosartorya fumigata (Aspergillus fumigatus); Aspergillus fumigatus Z5. Uncharacterized protein


Relationship
Family|Arb2_domain
Block| X
Position in NCBI Life Tree|Neosartorya fischeri
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Fungi: N E > Dikarya: N E > Ascomycota: N E > saccharomyceta: N E > Pezizomycotina: N E > leotiomyceta: N E > Eurotiomycetes: N E > Eurotiomycetidae: N E > Eurotiales: N E > Aspergillaceae: N E > Aspergillus: N E > Aspergillus fischeri: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: neofi-a1d0b8
Colored MSA for Arb2_domain (raw)
RLHDVIRAYQSKQLYDNFKLTSLYIYRTSISKSFENQVLASANYYQAVPL
IVIFHDPPEIMGLPHPVTNKLEAHNCWLADCMKNYIGWAVGKGYAVIDVN
IPKHVTMEPTTGKYEDEDENRPSATEELAGYLWDNYIEPNEATEIFFVGI
GNAFYGVANLLINRDTLYKRVNGVISFVAENPVRAIASHTQVWLSRWYKD
NSLVFVSHTHGVWNNVGRKPSKRYGHLIQSPKAGLSEMLMHHKDEVFKWI
EERADEAESEEETKSKSKSKSRSPTKEKPAELPPGPG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

RLHDVIRAYQSKQLYDNFKLTSLYIYRTSISKSFENQVLASANYYQAVPL
IVIFHDPPEIMGLPHPVTNKLEAHNCWLADCMKNYIGWAVGKGYAVIDVN
IPKHVTMEPTTGKYEDEDENRPSATEELAGYLWDNYIEPNEATEIFFVGI
GNAFYGVANLLINRDTLYKRVNGVISFVAENPVRAIASHTQVWLSRWYKD
NSLVFVSHTHGVWNNVGRKPSKRYGHLIQSPKAGLSEMLMHHKDEVFKWI
EERADEAESEEETKSKSKSKSRSPTKEKPAELPPGPG


References
    Title: Genome-wide transcriptomic analysis of a superior biomass-degrading strain of A. fumigatus revealed active lignocellulose-degrading genes
    Miao Y, Liu D, Li G, Li P, Xu Y, Shen Q, Zhang R
    Ref: BMC Genomics, 16:459, 2015 : PubMed

            

    Title: Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus
    Fedorova ND, Khaldi N, Joardar VS, Maiti R, Amedeo P, Anderson MJ, Crabtree J, Silva JC, Badger JH and Nierman WC <29 more author(s)>
    Ref: PLoS Genet, 4:e1000046, 2008 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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