Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: ornan-f6ybp3

Ornithorhynchus anatinus (Duckbill platypus) Uncharacterized protein

Relationship
Family|CIB-CCG1-interacting-factor-B
Block| X
Position in NCBI Life Tree|Ornithorhynchus anatinus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Prototheria: N E > Monotremata: N E > Ornithorhynchidae: N E > Ornithorhynchus: N E > Ornithorhynchus anatinus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : XP_003431373, XP_007670494
1 UniProt : A0A6I8N635
1 Interpro : A0A6I8N635
1 Pfam : A0A6I8N635
1 PIRSF : A0A6I8N635
1 SUPERFAM : A0A6I8N635
Sequence
Graphical view for this peptide sequence: ornan-f6ybp3
Colored MSA for CIB-CCG1-interacting-factor-B (raw)
SMPGHMTRPHLFLLVLGLLLTLFLYMLLPNAPSPSVLPPGVPNITVLTGL
VPGDSPLFYREALPVGRARRVEVVLLHGQAFSSHTWEKLGTLVLLSQHGY
RAVALDLPGYGNSAASPEAATEAGRLRLLTRTLRGLGLENPVLVSPSMSG
RYSLPLLLQGGGQLRGFVPIAPVATNKYSSEQYLGVKTPTLILYGELDRL
LGMKSLNSLRYIPNHSVVKLNGAGHACYLNKPHAFHTVLLDFLSELP
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

SMPGHMTRPHLFLLVLGLLLTLFLYMLLPNAPSPSVLPPGVPNITVLTGL
VPGDSPLFYREALPVGRARRVEVVLLHGQAFSSHTWEKLGTLVLLSQHGY
RAVALDLPGYGNSAASPEAATEAGRLRLLTRTLRGLGLENPVLVSPSMSG
RYSLPLLLQGGGQLRGFVPIAPVATNKYSSEQYLGVKTPTLILYGELDRL
LGMKSLNSLRYIPNHSVVKLNGAGHACYLNKPHAFHTVLLDFLSELP


Reference
    Title: Genome analysis of the platypus reveals unique signatures of evolution
    Warren WC, Hillier LW, Marshall Graves JA, Birney E, Ponting CP, Grutzner F, Belov K, Miller W, Clarke L and Wilson RK <94 more author(s)>
    Ref: Nature, 453:175, 2008 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer