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Gene_locus Report for: orysa-q75hy1

Oryza sativa subsp. japonica (Rice) putative serine carboxypeptidase

Comment
Oryza sativa subsp. japonica subsp. indica (Rice) Oryza glaberrima (African rice)


Relationship
Family|Carboxypeptidase_S10
Block| X
Position in NCBI Life Tree|Oryza sativa
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > Liliopsida: N E > Petrosaviidae: N E > commelinids: N E > Poales: N E > Poaceae: N E > BOP clade: N E > Oryzoideae: N E > Oryzeae: N E > Oryzinae: N E > Oryza: N E > Oryza sativa: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AC134929, AC098573
2 UniProt : Q75HY1, I1PYB7
2 UniProt : Q75HY1, I1PYB7
2 Interpro : Q75HY1, I1PYB7
2 Prodom : Q75HY1, I1PYB7
2 Pfam : Q75HY1, I1PYB7
2 PIRSF : Q75HY1, I1PYB7
2 SUPERFAM : Q75HY1, I1PYB7
Sequence
Graphical view for this peptide sequence: orysa-q75hy1
Colored MSA for Carboxypeptidase_S10 (raw)
MAPPSRPFYLVYVVIFVAVSLSATAATATAAAVLPRGALPTKSGYLPIPP
AANASLYFAFYEATEPVTPLATTPLLVWLEGGPGCSGFLSNFLQIGPYLF
AGGSLSPNPFAWNRRFGLLFIDSPLGTGFSVAPSPANIPTNQSVVADHVL
AALQSFLSLEPSFRARPLYLTGESYAGKTIPAAGALIVATNPTLPEQKRI
NLRGVAIGNGMTHPVAEVTTHADIAYFMGLINAKQKRAAEAMQAEAVALT
REERWREASAARARLMSWLENATGVVTLLDVEVQQSVAVMAAGLADFLST
AEVKAAVGARPDVAWEACSAAVGAAQEEDVMKSAKRDVEALLHRGASPTA
TPTPTRVLLYEGIRDVGNGPVCAEAWLRELEWDGLAAFQDAGRAVWRSGG
GLAGYVQRHDALVHVAVYGAGHFVPYSQGRVAQEMIEDWVFRKGLFSAGT
V
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MAPPSRPFYLVYVVIFVAVSLSATAATATAAAVLPRGALPTKSGYLPIPP
AANASLYFAFYEATEPVTPLATTPLLVWLEGGPGCSGFLSNFLQIGPYLF
AGGSLSPNPFAWNRRFGLLFIDSPLGTGFSVAPSPANIPTNQSVVADHVL
AALQSFLSLEPSFRARPLYLTGESYAGKTIPAAGALIVATNPTLPEQKRI
NLRGVAIGNGMTHPVAEVTTHADIAYFMGLINAKQKRAAEAMQAEAVALT
REERWREASAARARLMSWLENATGVVTLLDVEVQQSVAVMAAGLADFLST
AEVKAAVGARPDVAWEACSAAVGAAQEEDVMKSAKRDVEALLHRGASPTA
TPTPTRVLLYEGIRDVGNGPVCAEAWLRELEWDGLAAFQDAGRAVWRSGG
GLAGYVQRHDALVHVAVYGAGHFVPYSQGRVAQEMIEDWVFRKGLFSAGT
V


References
    Title: Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana
    Itoh T, Tanaka T, Barrero RA, Yamasaki C, Fujii Y, Hilton PB, Antonio BA, Aono H, Apweiler R and Sasaki T <85 more author(s)>
    Ref: Genome Res, 17:175, 2007 : PubMed

            

    Title: The map-based sequence of the rice genome.
    Matsumo T, Sasaki T
    Ref: Nature, 436:793, 2005 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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