Gene_Locus Report

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Gene_locus Report for: orysj-q0d9a4

Oryza sativa subsp. japonica (Rice) Os06g0730300 protein

Relationship
Family|Duf_829
Block| X
Position in NCBI Life Tree|Oryza sativa subsp. japonica
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > Liliopsida: N E > Petrosaviidae: N E > commelinids: N E > Poales: N E > Poaceae: N E > BOP clade: N E > Oryzoideae: N E > Oryzeae: N E > Oryzinae: N E > Oryza: N E > Oryza sativa: N E > Oryza sativa Japonica Group: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AP008212
1 UniProt : Q0D9A4
1 UniProt : Q0D9A4
1 Interpro : Q0D9A4
1 Pfam : Q0D9A4
1 PIRSF : Q0D9A4
1 SUPERFAM : Q0D9A4
Sequence
Graphical view for this peptide sequence: orysj-q0d9a4
Colored MSA for Duf_829 (raw)
MMASLHRPLSAMAVAAFAAVSSLELPDRLSHHKLPDTTVDAEAVVSIPAS
RPDVSAAPSASAMSRLHFLPRNLQTSHPAKAPPASLPVIHTVYHYAKFAK
YYSEEEAVTTAMPSSSSPDVLYLWHLPDPKVCGDSHGKSQTVVVLLGWLG
SRQKHLKRYADWYTSRGYHAVTFTLPMSDIVSYNVGGKAEKNVEMLSEHL
ADWVSEEDGKKIVFHTFSNTGWLCYGVILENLQRQDPSAMDKIKGCVVDS
APVAVPDSQVWASGFSAAIMKKHSVAAKGVKPNDARPDVLVVESNKDHPK
PAVSEAILLSALEKLFDVVLNYPAINRKLSGVMELLSSKQPKCPQLYIYS
SADRVIPAKSVESFVESQRRAGHEVRACDFVSSPHVDHYRSNPELYTSQL
TEFMEDCVLARCQAKEEEEEVTN
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MMASLHRPLSAMAVAAFAAVSSLELPDRLSHHKLPDTTVDAEAVVSIPAS
RPDVSAAPSASAMSRLHFLPRNLQTSHPAKAPPASLPVIHTVYHYAKFAK
YYSEEEAVTTAMPSSSSPDVLYLWHLPDPKVCGDSHGKSQTVVVLLGWLG
SRQKHLKRYADWYTSRGYHAVTFTLPMSDIVSYNVGGKAEKNVEMLSEHL
ADWVSEEDGKKIVFHTFSNTGWLCYGVILENLQRQDPSAMDKIKGCVVDS
APVAVPDSQVWASGFSAAIMKKHSVAAKGVKPNDARPDVLVVESNKDHPK
PAVSEAILLSALEKLFDVVLNYPAINRKLSGVMELLSSKQPKCPQLYIYS
SADRVIPAKSVESFVESQRRAGHEVRACDFVSSPHVDHYRSNPELYTSQL
TEFMEDCVLARCQAKEEEEEVTN



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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