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Gene_locus Report for: orysj-q0jhi5

Oryza sativa subsp. japonica (Rice) os01g0862000 protein

Relationship
Family|6_AlphaBeta_hydrolase
Block| X
Position in NCBI Life Tree|Oryza sativa subsp. japonica
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > Liliopsida: N E > Petrosaviidae: N E > commelinids: N E > Poales: N E > Poaceae: N E > BOP clade: N E > Oryzoideae: N E > Oryzeae: N E > Oryzinae: N E > Oryza: N E > Oryza sativa: N E > Oryza sativa Japonica Group: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AP008207
1 UniProt : Q0JHI5
1 UniProt : Q0JHI5
1 Interpro : Q0JHI5
1 Prodom : Q0JHI5
1 Pfam : Q0JHI5
1 PIRSF : Q0JHI5
1 SUPERFAM : Q0JHI5
Sequence
Graphical view for this peptide sequence: orysj-q0jhi5
Colored MSA for 6_AlphaBeta_hydrolase (raw)
MAASLRASSSSLRSRLLSSSSAAWSPWSHVLSSSVHSEASNQTETLAFDE
IQLSPEKPSTATAFVLHGLLGSGRNWRSFSRALASELRDRSPSDEWRMVL
VDLRNHGRSAGIKGLRPPHDMSTAARDLADLVKARGWAWPDVVVGHSMGG
KVALDFAESCSRGDYGESADLPKQNSFGCLILFLVK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MAASLRASSSSLRSRLLSSSSAAWSPWSHVLSSSVHSEASNQTETLAFDE
IQLSPEKPSTATAFVLHGLLGSGRNWRSFSRALASELRDRSPSDEWRMVL
VDLRNHGRSAGIKGLRPPHDMSTAARDLADLVKARGWAWPDVVVGHSMGG
KVALDFAESCSRGDYGESADLPKQNSFGCLILFLVK


References
    Title: Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana
    Itoh T, Tanaka T, Barrero RA, Yamasaki C, Fujii Y, Hilton PB, Antonio BA, Aono H, Apweiler R and Sasaki T <85 more author(s)>
    Ref: Genome Res, 17:175, 2007 : PubMed

            

    Title: The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information
    Ohyanagi H, Tanaka T, Sakai H, Shigemoto Y, Yamaguchi K, Habara T, Fujii Y, Antonio BA, Nagamura Y and Sasaki T <4 more author(s)>
    Ref: Nucleic Acids Research, 34:D741, 2006 : PubMed

            

    Title: The map-based sequence of the rice genome.
    Matsumo T, Sasaki T
    Ref: Nature, 436:793, 2005 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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