Gene_Locus Report

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Gene_locus Report for: palpw-e4t287

Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) Putative uncharacterized protein

Comment
n-term 40 deleted here


Relationship
Family|Glucuronoyl_esterase
Block| X
Position in NCBI Life Tree|Paludibacter propionicigenes
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > FCB group: N E > Bacteroidetes/Chlorobi group: N E > Bacteroidetes: N E > Bacteroidia: N E > Bacteroidales: N E > Paludibacteraceae: N E > Paludibacter: N E > Paludibacter propionicigenes: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP002345
1 UniProt : E4T287
1 UniProt : E4T287
1 Interpro : E4T287
1 Pfam : E4T287
1 PIRSF : E4T287
1 SUPERFAM : E4T287
Sequence
Graphical view for this peptide sequence: palpw-e4t287
Colored MSA for Glucuronoyl_esterase (raw)
LGIKSLRPGPSGNENAPNHANYDESIANPCPQLPDILTLKNGKKVTSADM
WWKLRRPEIVEDFEREVYGRLPKKIPAVTWTVKITDREFVGRTPVIAKQL
VGHVDNSEYPLINVNINMVVVLPTNVKGPVPVLIMFGPASLPSPAQPSAE
DLAKINAAFREMMIKNNPEMKAVLDKYPAYAPITKLAGPSFFAPPTDGNS
APTEQLLAAGWGYAAVDPSSIQADNAAGLTRGIIGLVNKGQPRKPDDWGA
LRAWSWGAARALDYLETDPLVDAKKVGIEGVSRYGKAALVTLAFEPRFAV
GLIGSSGKGGATLHRRVFGEAVESLTGGEYYWMAGNYMKYGASAATFGSK
TGCDLPVDSHELIALCAPRLTFISYGIPEKGDAKWLDQTGSYMATVAAGA
AFKLLGVKDIGVSNDYLKEKMPPMLTGLLEGELAWRQHDGGHTDAPNFQH
FIPWASKMLKYNKTAK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

LGIKSLRPGPSGNENAPNHANYDESIANPCPQLPDILTLKNGKKVTSADM
WWKLRRPEIVEDFEREVYGRLPKKIPAVTWTVKITDREFVGRTPVIAKQL
VGHVDNSEYPLINVNINMVVVLPTNVKGPVPVLIMFGPASLPSPAQPSAE
DLAKINAAFREMMIKNNPEMKAVLDKYPAYAPITKLAGPSFFAPPTDGNS
APTEQLLAAGWGYAAVDPSSIQADNAAGLTRGIIGLVNKGQPRKPDDWGA
LRAWSWGAARALDYLETDPLVDAKKVGIEGVSRYGKAALVTLAFEPRFAV
GLIGSSGKGGATLHRRVFGEAVESLTGGEYYWMAGNYMKYGASAATFGSK
TGCDLPVDSHELIALCAPRLTFISYGIPEKGDAKWLDQTGSYMATVAAGA
AFKLLGVKDIGVSNDYLKEKMPPMLTGLLEGELAWRQHDGGHTDAPNFQH
FIPWASKMLKYNKTAK


Reference
    Title: Complete genome sequence of Paludibacter propionicigenes type strain (WB4)
    Gronow S, Munk C, Lapidus A, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng JF, Tapia R and Klenk HP <24 more author(s)>
    Ref: Stand Genomic Sci, 4:36, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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