Gene_Locus Report

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Gene_locus Report for: panpa-a0a2r8zr38

Pan paniscus (Pygmy chimpanzee) (Bonobo). Abhydrolase domain containing 16B

Relationship
Family|ABHD16
Block| X
Position in NCBI Life Tree|Pan paniscus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Euarchontoglires: N E > Primates: N E > Haplorrhini: N E > Simiiformes: N E > Catarrhini: N E > Hominoidea: N E > Hominidae: N E > Homininae: N E > Pan: N E > Pan paniscus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AJFE02030818, XP_003809974.1
1 UniProt : A0A2R8ZR38
1 UniProt : A0A2R8ZR38
1 Interpro : A0A2R8ZR38
1 Prodom : A0A2R8ZR38
1 Pfam : A0A2R8ZR38
1 PIRSF : A0A2R8ZR38
1 SUPERFAM : A0A2R8ZR38
Sequence
Graphical view for this peptide sequence: panpa-a0a2r8zr38
Colored MSA for ABHD16 (raw)
MCVICFVKALVHVFKIYLTASYTYTFRGWPVAFRWDDVRAVGRSSSHRAL
TCAAAAAGVWLLRDETLGGDALGRPPRGARSQAQCLLQQLRELPGQLASY
ALAHSLGRWLVYPGSVSLMTRALLPLLQQGQERLVERYHGRRAKLVACDG
NEIDTMFMDRRQHPGSHGHGLRLVICCEGNAGFYEMGCLSAPLEAGYSVL
GWNHPGFGSSTGVPFPQHDANAMDVVVKYALHRLHFPPVHLVVYGWSVGG
FTATWATMTYPELGALVLDATFDDLVPLALKVMPHSWKGLVVRTVREHFN
LNVAEQLCCYPGPVLLLRRTQDDVVSTSGRLRPLSPGDVEGNRGNELLLR
LLEHRYPVVMAREGRAVVTRWLRAGSLAQEAAFYARYRVDEDWCLALLRS
YRARCEEELEGEEALGLHGPAFPWLVGQGLSSRRRRRLALFLARKHLKNV
EATHFSPLEPEEFQLPWRL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MCVICFVKALVHVFKIYLTASYTYTFRGWPVAFRWDDVRAVGRSSSHRAL
TCAAAAAGVWLLRDETLGGDALGRPPRGARSQAQCLLQQLRELPGQLASY
ALAHSLGRWLVYPGSVSLMTRALLPLLQQGQERLVERYHGRRAKLVACDG
NEIDTMFMDRRQHPGSHGHGLRLVICCEGNAGFYEMGCLSAPLEAGYSVL
GWNHPGFGSSTGVPFPQHDANAMDVVVKYALHRLHFPPVHLVVYGWSVGG
FTATWATMTYPELGALVLDATFDDLVPLALKVMPHSWKGLVVRTVREHFN
LNVAEQLCCYPGPVLLLRRTQDDVVSTSGRLRPLSPGDVEGNRGNELLLR
LLEHRYPVVMAREGRAVVTRWLRAGSLAQEAAFYARYRVDEDWCLALLRS
YRARCEEELEGEEALGLHGPAFPWLVGQGLSSRRRRRLALFLARKHLKNV
EATHFSPLEPEEFQLPWRL


Reference
    Title: The bonobo genome compared with the chimpanzee and human genomes
    Prufer K, Munch K, Hellmann I, Akagi K, Miller JR, Walenz B, Koren S, Sutton G, Kodira C and Paabo S <31 more author(s)>
    Ref: Nature, 486:527, 2012 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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