Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: peccp-c6der3

Pectobacterium carotovorum subsp. carotovorum (strain PC1) Dienelactone hydrolase

Relationship
Family|Abhydrolase_7
Block| X
Position in NCBI Life Tree|Pectobacterium carotovorum subsp. carotovorum
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Enterobacterales: N E > Pectobacteriaceae: N E > Pectobacterium: N E > Pectobacterium carotovorum: N E > Pectobacterium carotovorum subsp. carotovorum: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP001657
1 UniProt : C6DER3
1 UniProt : C6DER3
1 Interpro : C6DER3
1 Pfam : C6DER3
1 PIRSF : C6DER3
1 SUPERFAM : C6DER3
Sequence
Graphical view for this peptide sequence: peccp-c6der3
Colored MSA for Abhydrolase_7 (raw)
MNLNTLRSSVWLLAALLASPSLMANDMNPTIQPATNQAVTDEGLPSFYPQ
LKQQMTYSDSWLSGNFTDFSQWQSQSRKTLRSLLLTPDSTKDFAPQAIEK
QDRGSYTAEKVAFNLTDESRVDALLLTPKSAGPHPAVILLHDHGAKFDIG
KEKMIKPWGNDEQLVSAQAWADKFFTGRFVGDELAKRGYVVLAVDALGWG
SRGPIKYEQQQALASNFFNLGRSLAGLMAYEDMRATDFLASLEQVDKQRI
GVVGFSMGAYRAWQLAALSDKVAATAAVSWIGTYEGLMTPGNNVLRGQSA
FYMLHPGQPTRFDFPDVASVAAPKPMLLFNGGQDKLFPTKSVEDAYAKMH
EVWQSQRAGSKLQTKIWPELGHVFYQEQQEEVFRFLDQWLKP
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MNLNTLRSSVWLLAALLASPSLMANDMNPTIQPATNQAVTDEGLPSFYPQ
LKQQMTYSDSWLSGNFTDFSQWQSQSRKTLRSLLLTPDSTKDFAPQAIEK
QDRGSYTAEKVAFNLTDESRVDALLLTPKSAGPHPAVILLHDHGAKFDIG
KEKMIKPWGNDEQLVSAQAWADKFFTGRFVGDELAKRGYVVLAVDALGWG
SRGPIKYEQQQALASNFFNLGRSLAGLMAYEDMRATDFLASLEQVDKQRI
GVVGFSMGAYRAWQLAALSDKVAATAAVSWIGTYEGLMTPGNNVLRGQSA
FYMLHPGQPTRFDFPDVASVAAPKPMLLFNGGQDKLFPTKSVEDAYAKMH
EVWQSQRAGSKLQTKIWPELGHVFYQEQQEEVFRFLDQWLKP



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer