Gene_Locus Report

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Gene_locus Report for: phypa-a9s8c7

Physcomitrella patens subsp. patens (Moss) Predicted protein

Relationship
Family|Hydroxynitrile_lyase
Block| X
Position in NCBI Life Tree|Physcomitrella patens subsp. patens
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Bryophyta: N E > Bryophytina: N E > Bryopsida: N E > Funariidae: N E > Funariales: N E > Funariaceae: N E > Physcomitrella: N E > Physcomitrella patens: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : DS544944
1 UniProt : A9S8C7
1 UniProt : A9S8C7
1 Interpro : A9S8C7
1 Pfam : A9S8C7
1 PIRSF : A9S8C7
1 SUPERFAM : A9S8C7
Sequence
Graphical view for this peptide sequence: phypa-a9s8c7
Colored MSA for Hydroxynitrile_lyase (raw)
KQFIFVHGMGGGAWFWYEMITLLEHYGHKAIAVDLTSHGINKAVAENVIT
VAQYTKPLIDALTDVSGEVILVGHSLGGGSIAYASELFPNKVIKAIYLSA
VTPSYNQSMFSAFPANVSGFLETFPNLINAGYVTLNFKNGPNSNPTSASL
NRNALQEFYMSETPKRYVNLGKVLVTDTPYAPGTETLPLTPAKFGTVRRF
YIRTGKDEGVLPAHQDEMIANNPPEKVFCMPNGDHAVFFSAPMELFRILT
CIAGL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

KQFIFVHGMGGGAWFWYEMITLLEHYGHKAIAVDLTSHGINKAVAENVIT
VAQYTKPLIDALTDVSGEVILVGHSLGGGSIAYASELFPNKVIKAIYLSA
VTPSYNQSMFSAFPANVSGFLETFPNLINAGYVTLNFKNGPNSNPTSASL
NRNALQEFYMSETPKRYVNLGKVLVTDTPYAPGTETLPLTPAKFGTVRRF
YIRTGKDEGVLPAHQDEMIANNPPEKVFCMPNGDHAVFFSAPMELFRILT
CIAGL


Reference
    Title: The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants
    Rensing SA, Lang D, Zimmer AD, Terry A, Salamov A, Shapiro H, Nishiyama T, Perroud PF, Lindquist EA and Boore JL <60 more author(s)>
    Ref: Science, 319:64, 2008 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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