Gene_locus Report for: physp-g4ztb3 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines). Putative uncharacterized protein
Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Eukaryota: N E > Stramenopiles: N E > Oomycetes: N E > Peronosporales: N E > Phytophthora: N E > Phytophthora sojae: N E ABHD6-Lip :
physp-g4zqn9 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Putative uncharacterized protein .
ABHD13-BEM46 :
physp-g5a425 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines). AB hydrolase-1 domain-containing protein .
ABHD18 :
physp-g5a510 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines). Putative uncharacterized protein .
abh_upf0017 :
physp-g5abj7 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines). Hydrolase_4 domain-containing protein .
Carboxypeptidase_S10 :
physp-g4yut6 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Putative uncharacterized protein ,
physp-g4yut8 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Putative uncharacterized protein ,
physp-g5aav9 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Putative uncharacterized protein .
Cutinase :
physp-g4zwu9 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Cutin hydrolase ,
physp-g4ztq5 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Cutin hydrolase ,
physp-g4zwu8 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Cutin hydrolase ,
physp-g4zwv7 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Cutin hydrolase ,
physp-g4zwv6 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Putative uncharacterized protein ,
physp-g4zwv0 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Cutin hydrolase ,
physp-g4zwv8 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Cutin hydrolase ,
physp-g4zwv9 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Cutin hydrolase .
Duf_1057 :
physp-g5a2f0 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Putative uncharacterized protein ,
physp-g5a2f1 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Putative uncharacterized protein ,
physp-g5a2f3 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Putative uncharacterized protein .
FaeC :
physp-g4ytv0 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines). Uncharacterized protein .
Fungal_carboxylesterase_lipase :
physp-g4yw23 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) Putative uncharacterized protein ,
physp-g4zis3 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) Putative uncharacterized protein ,
physp-g4zqe3 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) Putative uncharacterized protein ,
physp-g4zqe4 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) Putative uncharacterized protein ,
physp-g4zqf0 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) Putative uncharacterized protein ,
physp-g5a582 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) Putative uncharacterized protein ,
physp-g5a583 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) Putative uncharacterized protein .
Kynurenine-formamidase :
physp-g4zm41 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines). N-formylkynurenine formamidase .
Maspardin-ACP33-SPG21_like :
physp-g4ynp3 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Putative uncharacterized protein .
Pectinacetylesterase-Notum :
physp-g5aci1 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines). Putative uncharacterized protein ,
physp-g4ztb2 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines). Putative uncharacterized protein ,
physp-g4yg47 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines). Putative uncharacterized protein ,
physp-g4yg46 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines). Putative uncharacterized protein ,
physp-g4zdt9 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines). Putative uncharacterized protein .
Valacyclovir-hydrolase :
physp-g4zwy9 Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines) Putative uncharacterized protein Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: physp-g4ztb3 Colored MSA for Pectinacetylesterase-Notum (raw)
MVHLSHVTKAAIALLALPVLATQAGTSTCEVTDSDACAIDSLTASTDDGS
VLIYPGGDTRCAFDDYTDSVTTFASNSTYFFQVFPAAEASKKKLLLFFQG
GGACVDKYTCDFALQCQLGASSLITTKASVTDSGIMNRTLDGNVFNDYNI
VYLPYCTGDLFVGNKYLEPYESVYNQALGNKQCLGQDQGMYMNGYNNTMA
VLKWALANYPDPEQLVIGGYSAGSLGAQMWSAYVAKTWGVESKGTKFQVL
ADSYVGVFPEHKTPASELINYYGGCGLVGFPDSMAAECEAETATVIEMVS
SLMNEAPSAEWLFIDSIADKTQRKFYELVLLGIAGYPFTNLLPADEFYGN
MTEILDAYSAFMNVTRFNIDSDQHVWLTGNTYESAESLEGGYLGDILSSW
LAHPSTPEATTTTSTSTPEASTAAAPTPAPTTKPAPTTVSAKTSKPLAFS
PQAQQLQELKQLMCSLLPHFNLHAPLC
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
M V H L S H V T K A A I A L L A L P V L A T Q A G T S T C E V T D S D A C A I D S L T A S T D D G S V L I Y P G G D T R C A F D D Y T D S V T T F A S N S T Y F F Q V F P A A E A S K K K L L L F F Q G G G A C V D K Y T C D F A L Q C Q L G A S S L I T T K A S V T D S G I M N R T L D G N V F N D Y N I V Y L P Y C T G D L F V G N K Y L E P Y E S V Y N Q A L G N K Q C L G Q D Q G M Y M N G Y N N T M A V L K W A L A N Y P D P E Q L V I G G Y S A G S L G A Q M W S A Y V A K T W G V E S K G T K F Q V L A D S Y V G V F P E H K T P A S E L I N Y Y G G C G L V G F P D S M A A E C E A E T A T V I E M V S S L M N E A P S A E W L F I D S I A D K T Q R K F Y E L V L L G I A G Y P F T N L L P A D E F Y G N M T E I L D A Y S A F M N V T R F N I D S D Q H V W L T G N T Y E S A E S L E G G Y L G D I L S S W L A H P S T P E A T T T T S T S T P E A S T A A A P T P A P T T K P A P T T V S A K T S K P L A F S P Q A Q Q L Q E L K Q L M C S L L P H F N L H A P L C
Reference
Title: Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesisTyler BM , Tripathy S , Zhang X , Dehal P , Jiang RH , Aerts A , Arredondo FD , Baxter L , Bensasson D and Boore JL <43 more author(s)> Tyler BM , Tripathy S , Zhang X , Dehal P , Jiang RH , Aerts A , Arredondo FD , Baxter L , Bensasson D , Beynon JL , Chapman J , Damasceno CM , Dorrance AE , Dou D , Dickerman AW , Dubchak IL , Garbelotto M , Gijzen M , Gordon SG , Govers F , Grunwald NJ , Huang W , Ivors KL , Jones RW , Kamoun S , Krampis K , Lamour KH , Lee MK , McDonald WH , Medina M , Meijer HJ , Nordberg EK , Maclean DJ , Ospina-Giraldo MD , Morris PF , Phuntumart V , Putnam NH , Rash S , Rose JK , Sakihama Y , Salamov AA , Savidor A , Scheuring CF , Smith BM , Sobral BW , Terry A , Torto-Alalibo TA , Win J , Xu Z , Zhang H , Grigoriev IV , Rokhsar DS , Boore JL (- 43) Ref: Science, 313 :1261, 2006 : PubMed Abstract ESTHER: Tyler_2006_Science_313_1261 PubMedSearch: Tyler 2006 Science 313 1261 PubMedID: 16946064 Gene_locus related to this paper: phyrm-h3ga89 ,
phyrm-h3gbl6.1 ,
phyrm-h3gbl6.2 ,
phyrm-h3gbl7 ,
phyrm-h3gdd4 ,
phyrm-h3gl36 ,
phyrm-h3gq42 ,
phyrm-h3gx86 ,
phyrm-h3gyi2 ,
phyrm-h3gyi3 ,
phyrm-h3gyi4 ,
phyrm-h3h292 ,
phyrm-h3h293 ,
phyrm-h3h967 ,
phyrm-h3hcf9 ,
physp-g4ynp3 ,
physp-g4yut6 ,
physp-g4yut8 ,
physp-g4yw23 ,
physp-g4zis3 ,
physp-g4zqe3 ,
physp-g4zqe4 ,
physp-g4zqf0 ,
physp-g4zqn9 ,
physp-g4zwy9 ,
physp-g5a582 ,
physp-g5a583 ,
physp-g5aav9 ,
phyrm-h3g9e7 ,
physp-g4zwu9 ,
phyrm-h3ggp1 ,
physp-g4ztq5 ,
physp-g4zwu8 ,
physp-g4zwv7 ,
physp-g4zwv6 ,
physp-g4zwv0 ,
physp-g4zwv8 ,
phyrm-h3gp95 ,
phyrm-h3g6r5 ,
physp-g4zwv9 ,
physp-g5a510 ,
phyrm-h3glu3 ,
physp-g5aci1 ,
phyrm-h3h2d0 ,
physp-g4ztb2 ,
physp-g4yg47 ,
phyrm-h3h2c9 ,
physp-g4ztb3 ,
phyrm-h3gvj3 ,
phyrm-h3gy62 ,
physp-g4yg46 ,
physp-g4zdt9 ,
phyrm-h3gdh5 ,
physp-g4zm41 ,
physp-g5abj7 ,
phyrm-h3gz76 ,
physp-g5a425 ,
phyrm-h3h080 ,
physp-g4ytv0 ,
phyrm-h3gcw7 Abstract
Draft genome sequences have been determined for the soybean pathogen Phytophthora sojae and the sudden oak death pathogen Phytophthora ramorum. Oomycetes such as these Phytophthora species share the kingdom Stramenopila with photosynthetic algae such as diatoms, and the presence of many Phytophthora genes of probable phototroph origin supports a photosynthetic ancestry for the stramenopiles. Comparison of the two species' genomes reveals a rapid expansion and diversification of many protein families associated with plant infection such as hydrolases, ABC transporters, protein toxins, proteinase inhibitors, and, in particular, a superfamily of 700 proteins with similarity to known oomycete avirulence genes.
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