Gene_Locus Report

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Gene_locus Report for: plaag-a0a073cfb0

Planktothrix agardhii; Planktothrix rubescens Uncharacterized protein

Comment
Other strains: Planktothrix agardhii (Oscillatoria agardhii) NIVA-CYA 126/8; Planktothrix rubescens Oscillatoria agardhii


Relationship
Family|Duf_1350
Block| X
Position in NCBI Life Tree|Planktothrix agardhii NIVA-CYA 126/8
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Cyanobacteria/Melainabacteria group: N E > Cyanobacteria: N E > Oscillatoriophycideae: N E > Oscillatoriales: N E > Microcoleaceae: N E > Planktothrix: N E > Planktothrix agardhii: N E > Planktothrix agardhii NIVA-CYA 126/8: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : WP_026789099
2 UniProt : A0A073CFB0, A0A1J1JIY5
2 Interpro : A0A073CFB0, A0A1J1JIY5
2 Pfam : A0A073CFB0, A0A1J1JIY5
2 PIRSF : A0A073CFB0, A0A1J1JIY5
2 SUPERFAM : A0A073CFB0, A0A1J1JIY5
Sequence
Graphical view for this peptide sequence: plaag-a0a073cfb0
Colored MSA for Duf_1350 (raw)
MDWLSISGNWVLIPPRPQAILHFLGGAFVATLPHLTYRCLLEELAHQGYA
IVATPFINNLDHTAIAQEVFEIFEDGLYDLYDLQFLKRRGLPIYGLGHSM
GCKIHLLIGSLFPVERSGNILMSFNNYAASQSIPLVEQISQFMDVEFTPS
PEETNLLVSDRYQIRRNLLIKFSKDTLDQTSNLHHILDQKFPGLTTLQKL
NGDHQTPLGQNINWSVGETFTPLDAIGQWIKQAVYQDLNQLKKQILYWLN
PLLK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MDWLSISGNWVLIPPRPQAILHFLGGAFVATLPHLTYRCLLEELAHQGYA
IVATPFINNLDHTAIAQEVFEIFEDGLYDLYDLQFLKRRGLPIYGLGHSM
GCKIHLLIGSLFPVERSGNILMSFNNYAASQSIPLVEQISQFMDVEFTPS
PEETNLLVSDRYQIRRNLLIKFSKDTLDQTSNLHHILDQKFPGLTTLQKL
NGDHQTPLGQNINWSVGETFTPLDAIGQWIKQAVYQDLNQLKKQILYWLN
PLLK



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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