Gene_locus Report for: psef5-q4k4y2 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) Putative uncharacterized protein
Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) > cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Pseudomonadales: N E > Pseudomonadaceae: N E > Pseudomonas: N E > Pseudomonas fluorescens group: N E > Pseudomonas fluorescens: N E
6_AlphaBeta_hydrolase :
psef5-q4k6z9 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hydrolase, alpha/beta hydrolase fold family, putative ,
psef5-q4k8j2 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hydrolase, alpha/beta fold family ,
psef5-q4kc21 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) bioh protein, putative ,
psef5-q4kcq2 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) Esterase, putative ,
psef5-q4kcx3 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hydrolase, alpha/beta fold family ,
psef5-q4ke18 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hypothetical protein ,
psef5-q4kf14 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) Hydrolase, putative ,
psef5-q4kfj4 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) esterase/lipase/thioesterase family protein ,
psef5-q4kfw0 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hydrolase, alpha/beta fold family ,
psef5-q4kfw1 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hypothetical protein ,
psef5-q4kgg3 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hydrolase, alpha/beta fold family ,
psef5-q4kgs6 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) 3-hydroxyacyl-CoA-acyl carrier protein transferase ,
psef5-q4kk20 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hypothetical protein ,
psef5-q4kk22 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) Delta 12 desaturase ,
psefl-b1pwe2 Pseudomonas fluorescens 3-hydroxyacyl-CoA:ACP acyl transferase ,
psefl-estF1 Pseudomonas fluorescens lactone-specific esterase (estf1) gene ,
psefl-EstX Pseudomonas fluorescens EstX ,
psefl-MUPL Pseudomonas fluorescens mupl ,
psefl-MUPV Pseudomonas fluorescens mupv ,
psefs-c3jzq8 Pseudomonas fluorescens (strain SBW25) Conserved hypothetical exported protein ,
psefs-c3k3d6 Pseudomonas fluorescens (strain SBW25) Rhamnosyltransferase 1 subunit A ,
psefs-c3kdh9 Pseudomonas fluorescens (strain SBW25) (R)-3-hydroxydecanoyl-ACP:CoA transacylase ,
psefs-c3ke34 Pseudomonas fluorescens (strain SBW25) Putative family S33 unassigned peptidase ,
psepf-q3k8g4 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold ,
psepf-q3k8g5 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold ,
psepf-q3kdd7 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold ,
psepf-q3ke06 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold precursor ,
psepf-q3kf33 Pseudomonas fluorescens (strain Pf0-1) Putative uncharacterized protein ,
psepf-q3kfe2 Pseudomonas fluorescens (strain PfO-1) lipase, putative ,
psepf-q3kgd4 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold ,
psepf-q3kgm9 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold .
A85-EsteraseD-FGH :
psef5-q4khf1 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) esterase, putative ,
psepf-q3kh87 Pseudomonas fluorescens (strain PfO-1; SBW25) putative esterase .
A85-IroE-IroD-Fes-Yiel :
psef5-q4kdb4 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) putative esterase superfamily .
ABHD6-Lip :
psef5-q4kej0 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hydrolase, alpha/beta hydrolase fold family , putative ,
psepf-q3kel6 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold precursor .
ABHD13-BEM46 :
psef5-q4kaz4 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) bem46 protein ,
psef5-q4khl0 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) lipoprotein, putative ,
psepf-q3kew2 Pseudomonas fluorescens (strain PfO-1) hypothetical protein precursor ,
psepf-q3khe9 Pseudomonas fluorescens (strain PfO-1) lipoprotein, putative ,
psefs-c3keb8 Pseudomonas fluorescens (strain SBW25). Putative lipoprotein .
abh_upf0017 :
psef5-q4k4b4 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hydrolase, alpha/beta fold family ,
psefs-c3k3m8 Pseudomonas fluorescens (strains SBW25; WH6) Putative uncharacterized protein ,
psepf-q3k576 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold .
abh_upf00227 :
psef5-q4kj95 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hypothetical protein ,
psepf-q3kj14 Pseudomonas fluorescens (strain PfO-1) hypothetical protein .
Aclacinomycin-methylesterase_RdmC :
psef5-q4k713 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hydrolase, alpha/beta fold family ,
psefs-c3k8y7 Pseudomonas fluorescens (strain SBW25) Putative exported hydrolase ,
psepf-q3k7h4 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold precursor .
AcoC_BiotinLipoyl-ABH :
psef5-q4keq4 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) (EC 2.3.1.12) .
AlphaBeta_hydrolase :
psef5-q4kcj3 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) lactone-specific esterase ,
psef5-q4kcn8 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hydrolase, alpha/beta fold family ,
psepf-q3kd63 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold precursor .
Bacterial_lip_FamI.1 :
psef5-q4kj24 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477); Pseudomonas plecoglossicida strain 7 lipase A lipase ,
psefl-lipa Pseudomonas fluorescens lipase(lipA) gene [SIK W1, Genomic, 1595 nt] ,
psepf-q3kbp5 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold ,
psepf-q3kiu1 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold .
Bacterial_lip_FamI.3 :
psef5-q4kbs3 Pseudomonas protegens (strain Pf-5 / ATCC BAA-477) polyurethanase B PUEB and secreted hemolysin-type EhxA RTX family calcium-binding bacteriocin, putative ,
psef5-q4kbs6 Pseudomonas protegens (strain Pf-5 / ATCC BAA-477) polyurethanase A PUEA and secreted hemolysin-type RTX family calcium-binding bacteriocin ,
psefl-LIPAPF33 Pseudomonas fluorescens; Pseudomonas sp. AMS8 lipase LipAMS8, extracellular lipase ,
psefl-lipb Pseudomonas fluorescens lipase ,
psefl-LIPB2 Pseudomonas fluorescens lipase ,
psefl-PULA Pseudomonas fluorescens polyurethanase lipase A ,
psefl-q6gx93 Pseudomonas fluorescens ( and strain PfO-1) lipase ,
psefl-q7wzt7 Pseudomonas fluorescens lipase lipJ02 ,
psefl-q76d31 Pseudomonas fluorescens lipase (EC 3.1.1.3) ,
psefl-q670w0 Pseudomonas fluorescens lipase ,
psefl-siklip Pseudomonas fluorescens gene for triacylglycerol lipase, complete cds ,
psefl-TLIA Pseudomonas fluorescens thermostable lipase tlia ,
psepf-q3kcs9 Pseudomonas fluorescens (strain PfO-1) triacylglycerol lipase (EC 3.1.1.3) .
BioH :
psef5-q4k4t4 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) bioh protein ,
psefs-c3k362 Pseudomonas fluorescens (strain SBW25) Putative biotin biosynthesis-related protein ,
psepf-q3k5p3 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold .
CarbLipBact_2 :
psef5-q4k717 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) Carboxylesterase ,
psefl-a0a0d0six1 Pseudomonas fluorescens. Strain 2-79 PFLU3_contig000018, whole genome shotgun sequence .
Carbon-carbon_bond_hydrolase :
psefl-cumD Pseudomonas fluorescens cumD 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase,
psefl-NAHN Pseudomonas fluorescens 2-hydroxymuconic semialdehyde hydrolase .
Carboxymethylbutenolide_lactonase :
psef5-q4kh30 Pseudomonas fluorescens; Pseudomonas protegens, 3-oxoadipate enol-lactonase (EC 3.1.1.24) ,
psefl-q6v6x4 Pseudomonas fluorescens. Putative hydrolase ,
psefs-c3kan9 Pseudomonas fluorescens (strain SBW25) Putative aromatic-hydrocarbons degradation-related hydrolase ,
psepf-q3kb84 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold ,
psepf-q3kgt9 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase ,
psefl-a0a075pjy9 Pseudomonas fluorescens. 3-oxoadipate enol-lactonase .
Carb_B_Bacteria :
psefl-a0a143gh74 Pseudomonas fluorescens; Pseudomonas yamanorum. Carboxylesterase, type B .
CFTR-inhibitory-factor_Cif :
psef5-q4kax4 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) epoxide hydrolase-related protein ,
psepf-q3kdj7 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold precursor .
Dienelactone_hydrolase :
psef5-q4k873 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) dienelactone hydrolase family protein ,
psef5-q4kfx7 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) dienelactone hydrolase family protein ,
psepf-q3k8c5 Pseudomonas fluorescens (strain PfO-1) dienelactone hydrolase precursor ,
psepf-q3kft7 Pseudomonas fluorescens (strain PfO-1) dienelactone hydrolase .
Duf_726 :
psefs-c3k8m7 Pseudomonas fluorescens (strain SBW25) Putative uncharacterized protein ,
psepf-q3kcu9 Pseudomonas fluorescens (strain Pf0-1) Putative uncharacterized protein .
Duf_900 :
psef5-q4kda1 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) Putative lipoprotein .
Duf_3530 :
psefs-c3k320 Pseudomonas fluorescens (strain SBW25) Putative uncharacterized protein ,
psepf-q3k5t9 Pseudomonas fluorescens (strain Pf0-1) Putative uncharacterized protein .
Epoxide_hydrolase :
psef5-q4k906 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) 3-oxoadipate enol-lactone hydrolase family protein ,
psef5-q4k982 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) ephb, putative ,
psef5-q4kch8 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) epha ,
psefs-c3k5q5 Pseudomonas fluorescens (strain SBW25) Putative hydrolase ,
psefs-c3kbe5 Pseudomonas fluorescens (strain SBW25) Putative epoxide hydrolase ,
psepf-q3k468 Pseudomonas fluorescens (strain PfO-1) epoxide hydrolase-like precursor ,
psepf-q3k978 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold ,
psepf-q3kbr1 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold ,
psepf-q3kdm7 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold precursor ,
psepf-q3ke08 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold precursor ,
psepf-q3ke09 Pseudomonas fluorescens (strain PfO-1) epoxide hydrolase-like precursor ,
psepf-q3kf76 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold .
Extracel-MCL-phaZ :
psefl-phaz Pseudomonas fluorescens. Poly(3-hydroxyoctanoate) depolymerase .
Fungal-Bact_LIP :
psef5-q4kck4 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hypothetical protein .
Haloacetate_dehalogenase :
psef5-q4k7i6 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hydrolase, alpha/beta fold family ,
psefs-c3k927 Pseudomonas fluorescens (strain SBW25) Putative hydrolase ,
psepf-q3k995 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold .
Haloperoxidase :
psef5-q4kb21 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) esterase ,
psefl-cpoF Pseudomonas fluorescens non-heme chloroperoxidase (cpoF),
psefl-este Pseudomonas fluorescens SIK WI (and strain SBW25) esterase gene, complete cds,
psepf-q3kb51 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold ,
psepf-q3kdf3 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold ,
psepf-q3ke91 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold .
Homoserine_transacetylase :
psef5-metx Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477; strain SBW25) homoserine o-acetyltransferase (EC 2.3.1.31) (homoserine transacetylase) (hta) ,
psef5-q4kbd7 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hydrolase, alpha/beta fold family ,
psepf-metx Pseudomonas fluorescens (strain PfO-1) acetylase) (homoserine transacetylase) (hta) .
Hormone-sensitive_lipase_like :
psef5-q4k9i3 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) monooxygenase, flavin-binding ,
psef5-q4kd54 Pseudomonas fluorescens; Pseudomonas protegens; Pseudomonas sp. lipase, putative ,
psepf-q3k919 Pseudomonas fluorescens, Pseudomonas sp., esterase/lipase/thioesterase precursor ,
psepf-q3kca1 Pseudomonas fluorescens (strain PfO-1) esterase/lipase/thioesterase ,
psepf-q3ke24 Pseudomonas fluorescens (strain PfO-1) esterase/lipase/thioesterase ,
psepf-q3keu4 Pseudomonas fluorescens (strain PfO-1) esterase/lipase/thioesterase precursor ,
psepf-q3kje2 Pseudomonas fluorescens; Pseudomonas sp.; Pseudomonas putida lipolytic enzyme ,
psefl-a0a0f4tvz7 Pseudomonas fluorescens. Uncharacterized protein ,
psefl-a0a0f4v6u4 Pseudomonas fluorescens Esterase ,
psefl-a0a0f4te50 Pseudomonas fluorescens Esterase ,
psefl-a0a1b3div8 Pseudomonas fluorescens Lipase ,
psefl-a0a1t2ys16 Pseudomonas fluorescens Lipase ,
psefl-a0a0w0i4l7 Pseudomonas fluorescens Lipase ,
psefl-a0a145x9k4 Pseudomonas fluorescens; Pseudomonas yamanorum Lipolytic enzyme ,
psefl-a0a010rrf3 Pseudomonas fluorescens Lipolytic protein ,
psefl-a0a0n9wuu8 Pseudomonas fluorescens Lipase ,
psefl-a0a0x7k4b6 Pseudomonas fluorescens Lipase ,
psefl-a0a161z1a4 Pseudomonas fluorescens Lipase .
Hydrolase_RBBP9_YdeN :
psef5-q4kk59 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hypothetical protein ,
psepf-q3kju1 Pseudomonas fluorescens (strain PfO-1) hypothetical protein .
Lipase_3 :
psepf-q3kk13 Pseudomonas fluorescens (strain PfO-1) lipase, class 3 .
LYsophospholipase_carboxylesterase :
psef5-q4k5b5 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hypothetical protein ,
psef5-q4keh1 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) phospholipase/carboxylesterase family protein ,
psef5-q4khv5 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) carboxylesterase (EC 3.1.1.1) ,
psefl-cxes1 Pseudomonas fluorescens genes for esterase A ,
psefl-cxest Pseudomonas fluorescens carboxylesterase EST2 estB,
psepf-q3kej7 Pseudomonas fluorescens (strain PfO-1) phospholipase/carboxylesterase precursor ,
psepf-q3khp1 Pseudomonas fluorescens (strain PfO-1) phospholipase/carboxylesterase .
MEST-like :
psef5-q4ki42 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hydrolase, alpha/beta fold family ,
psefs-c3k1v7 Pseudomonas fluorescens (strain SBW25) Putative hydrolase ,
psepf-q3khw1 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold .
Monoglyceridelipase_lysophospholip :
psef5-q4k3c9 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hypothetical protein ,
psef5-q4k7u9 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hydrolase, alpha/beta fold family ,
psef5-q4k458 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477; WH6) Putative uncharacterized protein ,
psefs-c3jz63 Pseudomonas fluorescens (strain SBW25; WH6) Putative uncharacterized protein ,
psefs-c3k3s9 Pseudomonas fluorescens (strain SBW25) Putative uncharacterized protein ,
psepf-q3k524 Pseudomonas fluorescens (strain Pf0-1) Putative uncharacterized protein ,
psepf-q3k812 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold .
NFM-deformylase :
psefs-c3k9x6 Pseudomonas fluorescens (strain SBW25). Uncharacterized protein ,
psefl-a0a0d0tby5 Pseudomonas fluorescens. NicD protein .
NLS3-Tex30 :
psefs-c3jxp6 Pseudomonas fluorescens (strain SBW25) Uncharacterized protein ,
psepf-q3kf85 Pseudomonas fluorescens (strain Pf0-1) Uncharacterized protein ,
psef5-q4kfd8 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) Uncharacterized protein .
PHA_depolymerase_arom :
psepf-PHAZ Pseudomonas fluorescens, Pseudomonas mediterranea, Pseudomonas corrugata, Pseudomonas sp., Comamonas testosteroni (Pseudomonas testosteroni), Pseudomonas chlororaphis (Pseudomonas aureofaciens), Pseudomonas brassicacearum, poly(3-hydroxyalkanoate) depolymerase ,
psepf-q3kch8 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold .
PHA_synth_II :
psef5-q4kjk5 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) poly(3-hydroxyalkanoate) polymerase 1 ,
psef5-q4kjk7 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) poly(3-hydroxyalkanoate) polymerase ,
psefl-q6xh00 Pseudomonas fluorescens phac ,
psepf-q3kjb8 Pseudomonas fluorescens (strain PfO-1) poly(r)-hydroxyalkanoic acid synthase, class II ,
psepf-q3kjc0 Pseudomonas fluorescens (strain PfO-1) poly(r)-hydroxyalkanoic acid synthase, class II .
PMH_Peptidase_S9 :
psef5-q4k4u7 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) prolyl oligopeptidase family protein ,
psefl-q32x72 Pseudomonas fluorescens dipeptidyl aminopeptidase/acylaminoacyl-peptidase ,
psepf-q3k5q5 Pseudomonas fluorescens (strain PfO-1) peptidase s9, prolyl oligopeptidase active site region .
PolyAspartate-hydrolase :
psepf-q3k6f3 Pseudomonas fluorescens (strain Pf0-1) Putative exported protein .
Proline_iminopeptidase :
psef5-q4k5w4 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) proline iminopeptidase, putative ,
psef5-q4kjm8 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) proline iminopeptidase (EC 3.4.11.5) ,
psefs-c3k632 Pseudomonas fluorescens; Pseudomonas sp. Putative proline iminopeptidase ,
psefs-laaa Pseudomonas fluorescens; Pseudomonas azotoformans; Pseudomonas sp. L-amino acid amidas.e L-proline amide hydrolase ,
psepf-q3ka37 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold ,
psepf-q3kje1 Pseudomonas fluorescens (strain PfO-1) proline iminopeptidase (pip) (prolyl aminopeptidase) (pap) ,
psefs-c3k813 Pseudomonas fluorescens; Pseudomonas synxantha; Pseudomonas sp. Proline iminopeptidase .
RsbQ-like :
psefs-c3k7v4 Pseudomonas fluorescens (strain SBW25) Putative hydrolase .
S9N_PREPL_Peptidase_S9 :
psef5-q4kgj9 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) protease II ,
psepf-q3kgg4 Pseudomonas fluorescens (strain PfO-1) oligopeptidase b (EC 3.4.21.83) .
Thioesterase :
psef5-q4k989 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) thioesterase ,
psef5-q4k993 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) non-ribosomal peptide synthase ,
psef5-q4kay8 Pseudomonas fluorescens, pyochelin synthetase f PchF ,
psef5-q4kaz0 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) pyochelin biosynthetic protein pchc pa4229 ,
psef5-q4kcd3 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) nonribosomal peptide synthase ,
psef5-q4kes9 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) nonribosomal peptide synthetase ,
psef5-q4kkf7 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) thioesterase ,
psefl-MMPII Pseudomonas fluorescens MMPII ,
psefl-PLTG Pseudomonas fluorescens putative thioesterase ( and strain Pf-5 / ATCC BAA-477) cfa synthetase, thioesterase component ,
psefl-Q8RQA8 Pseudomonas fluorescens putative thioesterase ,
psepf-q3kdz6 Pseudomonas fluorescens (strain PfO-1) amino acid adenylation ,
psepf-q3kdz7 Pseudomonas fluorescens (strain PfO-1) amino acid adenylation ,
psepf-q3ke50.1 Pseudomonas fluorescens (strain PfO-1) amino acid adenylation ,
psepf-q3ke50.2 Pseudomonas fluorescens (strain PfO-1) amino acid adenylation ,
psepf-q3kf64 Pseudomonas fluorescens (strain PfO-1) amino acid adenylation ,
psepf-q3kf69 Pseudomonas fluorescens (strain PfO-1) thioesterase precursor .
UCP031982 :
psef5-q4k5k6 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) Putative uncharacterized protein ,
psef5-q4kc18 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) Lipoprotein, putative ,
psefs-c3k9z2 Pseudomonas fluorescens (strain SBW25) Conserved hypothetical exported protein ,
psefs-c3k032 Pseudomonas fluorescens (strain SBW25) Putative exported protein ,
psepf-q3kd07 Pseudomonas fluorescens (strain Pf0-1) Putative uncharacterized protein .
UCP037442 :
psef5-q4kjt7 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) hydrolase, alpha/beta fold family ,
psefs-c3k6c6 Pseudomonas fluorescens (strain SBW25) Putative uncharacterized protein ,
psepf-q3kjj6 Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase fold .
VirJ :
psef5-q4kha2 Pseudomonas fluorescens; Pseudomonas sp.; Pseudomonas protegens, hypothetical protein ,
psepf-q3kh20 Pseudomonas fluorescens; Pseudomonas sp. virulence protein precursor ,
psefl-a0a075p6j0 Pseudomonas fluorescens. Virulence factor family protein ,
psefl-a0a0b7d7s4 Pseudomonas fluorescens; Pseudomonas sp.. Bacterial virulence protein (VirJ) ,
psefl-a0a0c1zqd8 Pseudomonas fluorescens; Pseudomonas sp.; Pseudomonas koreensis; Pseudomonas granadensis; Pseudomonas moraviensis. Virulence factor family protein ,
psefl-a0a0d0pac2 Pseudomonas fluorescens. Virulence factor family protein ,
psefl-a0a0d0tlv6 Pseudomonas fluorescens; Pseudomonas sp.; Pseudomonas libanensis; Pseudomonas synxantha. Bacterial virulence protein (VirJ) ,
psefl-a0a0f4t1v9 Pseudomonas fluorescens; Pseudomonas sp. Virulence factor family protein ,
psefl-a0a0f4tn25 Pseudomonas fluorescens; Pseudomonas sp.. Virulence factor family protein ,
psefl-a0a0n9ws51 Pseudomonas fluorescens; Pseudomonas sp. Virulence factor family protein ,
psefl-a0a0x7k5c6 Pseudomonas fluorescens. Virulence factor family protein ,
psefl-a0a143gcb5 Pseudomonas fluorescens. Type IV secretory pathway, VirJ component .
Xaa-Pro-like_dom :
psefl-a0a143gks7 Pseudomonas fluorescens. Putative hydrolase ,
psefl-a0a0p8xws0 Pseudomonas fluorescens. X-Pro dipeptidyl-peptidase family protein Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can
retrieve all strain data
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) Pseudomonas fluorescens Pf-5:
N ,
E .
Pseudomonas protegens Pf-5:
N ,
E .
Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: psef5-q4k4y2 Colored MSA for Duf_3530 (raw)
MPLVHRSALPALCLSLILPWTFSVQAADPAPETKTPEEQPAQRQPLPERS
QKDAAALERQLPALEQQQLQAGGDTFLALWKPANTSDPKGVVIILPGAGE
TADWPQAIAPLRNKLPDTEWASLSLTLPDMLSEAAQPRVVEAAPVPTDKA
NTAKDASTEAKPIEQVAGGEADVADRVVAESTEEQIKADAERIFTRVDAA
LAFAEQQNARSIVLLGHGTGAYWAARYLSEKQPAQVQKLVMVAAQSPANG
KPQLAEITPTLKLATADFFYVDKPLAQKAALERLQASKRLKHSNFSQIPL
KALPGNNTAQQEQLFRRVRGWLNPQNTDS
Legend
This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA
M P L V H R S A L P A L C L S L I L P W T F S V Q A A D P A P E T K T P E E Q P A Q R Q P L P E R S Q K D A A A L E R Q L P A L E Q Q Q L Q A G G D T F L A L W K P A N T S D P K G V V I I L P G A G E T A D W P Q A I A P L R N K L P D T E W A S L S L T L P D M L S E A A Q P R V V E A A P V P T D K A N T A K D A S T E A K P I E Q V A G G E A D V A D R V V A E S T E E Q I K A D A E R I F T R V D A A L A F A E Q Q N A R S I V L L G H G T G A Y W A A R Y L S E K Q P A Q V Q K L V M V A A Q S P A N G K P Q L A E I T P T L K L A T A D F F Y V D K P L A Q K A A L E R L Q A S K R L K H S N F S Q I P L K A L P G N N T A Q Q E Q L F R R V R G W L N P Q N T D S
Reference
Title: Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5
Paulsen IT , Press CM , Ravel J , Kobayashi DY , Myers GS , Mavrodi DV , DeBoy RT , Seshadri R , Ren Q and Loper JE <19 more author(s)>
Paulsen IT , Press CM , Ravel J , Kobayashi DY , Myers GS , Mavrodi DV , DeBoy RT , Seshadri R , Ren Q , Madupu R , Dodson RJ , Durkin AS , Brinkac LM , Daugherty SC , Sullivan SA , Rosovitz MJ , Gwinn ML , Zhou L , Schneider DJ , Cartinhour SW , Nelson WC , Weidman J , Watkins K , Tran K , Khouri H , Pierson EA , Pierson LS, 3rd , Thomashow LS , Loper JE (- 19)
Ref: Nat Biotechnol, 23 :873, 2005 : PubMed Abstract ESTHER: Paulsen_2005_Nat.Biotechnol_23_873 PubMedSearch: Paulsen 2005 Nat.Biotechnol 23 873 PubMedID: 15980861 Gene_locus related to this paper: psef5-metx ,
psef5-q4k3c9 ,
psef5-q4k4b4 ,
psef5-q4k4t4 ,
psef5-q4k4u7 ,
psef5-q4k4y2 ,
psef5-q4k5b5 ,
psef5-q4k5k6 ,
psef5-q4k5w4 ,
psef5-q4k6z9 ,
psef5-q4k7i6 ,
psef5-q4k7u9 ,
psef5-q4k8j2 ,
psef5-q4k9i3 ,
psef5-q4k458 ,
psef5-q4k713 ,
psef5-q4k717 ,
psef5-q4k873 ,
psef5-q4k906 ,
psef5-q4k982 ,
psef5-q4k989 ,
psef5-q4k993 ,
psef5-q4kax4 ,
psef5-q4kay8 ,
psef5-q4kaz0 ,
psef5-q4kaz4 ,
psef5-q4kb21 ,
psef5-q4kbd7 ,
psef5-q4kbs3 ,
psef5-q4kbs6 ,
psef5-q4kc18 ,
psef5-q4kc21 ,
psef5-q4kcd3 ,
psef5-q4kch8 ,
psef5-q4kcj3 ,
psef5-q4kck4 ,
psef5-q4kcn8 ,
psef5-q4kcq2 ,
psef5-q4kcx3 ,
psef5-q4kd54 ,
psef5-q4kda1 ,
psef5-q4kdb4 ,
psef5-q4ke18 ,
psef5-q4keh1 ,
psef5-q4kej0 ,
psef5-q4keq4 ,
psef5-q4kes9 ,
psef5-q4kf14 ,
psef5-q4kfj4 ,
psef5-q4kfw0 ,
psef5-q4kfw1 ,
psef5-q4kfx7 ,
psef5-q4kgg3 ,
psef5-q4kgj9 ,
psef5-q4kgs6 ,
psef5-q4kh30 ,
psef5-q4kha2 ,
psef5-q4khf1 ,
psef5-q4khl0 ,
psef5-q4khv5 ,
psef5-q4ki42 ,
psef5-q4kj24 ,
psef5-q4kj95 ,
psef5-q4kjk5 ,
psef5-q4kjk7 ,
psef5-q4kjm8 ,
psef5-q4kjt7 ,
psef5-q4kk20 ,
psef5-q4kk22 ,
psef5-q4kk59 ,
psef5-q4kkf7 ,
psefl-PLTG ,
psepf-PHAZ ,
psef5-q4kfd8 Abstract
Pseudomonas fluorescens Pf-5 is a plant commensal bacterium that inhabits the rhizosphere and produces secondary metabolites that suppress soilborne plant pathogens. The complete sequence of the 7.1-Mb Pf-5 genome was determined. We analyzed repeat sequences to identify genomic islands that, together with other approaches, suggested P. fluorescens Pf-5's recent lateral acquisitions include six secondary metabolite gene clusters, seven phage regions and a mobile genomic island. We identified various features that contribute to its commensal lifestyle on plants, including broad catabolic and transport capabilities for utilizing plant-derived compounds, the apparent ability to use a diversity of iron siderophores, detoxification systems to protect from oxidative stress, and the lack of a type III secretion system and toxins found in related pathogens. In addition to six known secondary metabolites produced by P. fluorescens Pf-5, three novel secondary metabolite biosynthesis gene clusters were also identified that may contribute to the biocontrol properties of P. fluorescens Pf-5.
         Other Papers