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psepu-PHAZ

Pseudomonas putida, Pseudomonas sp., Pseudomonas entomophila, pha depolymerase poly(3-hydroxyalkanoate)depolymerase (phaZ)

Comment

Other strains: Pseudomonas putida (Arthrobacter siderocapsulatus) (strain BIRD-1\; KT2440\; GB-1\; F1 \/ ATCC 700007\; W619), Pseudomonas sp. (strains LDC-25\; TJI-51\; gl01), Pseudomonas entomophila (strain L48) Intracellular nPHAMCL

Relationship

Family : PHA_depolymerase_arom

Block : X

Position in NCBI Life Tree : Pseudomonas putida

Molecular evidence

No mutation

No structure

No kinetic

No disease

No substrate

No inhibitor

Database

Sequence

Peptide

MPEPYIFRTV ELDDQSIRTA VRPGKPHLTP LPIFNGIGAN LELVFPFIEA LDPDLEGIAF DVPGVGGSST PRHPYRFPGL AKLTARMLDY LDYGQVSAIG VSWGGALAQQ FAHDYPERCK KLVLAATAAG AVMVPGKPKV LWMMASPRRY VQPSHVIRIA PMIYGGAFRR DPDLAMHHAS KVRSGGKMGY YWQLFAGLGW TSIHWLHKIH QPTLVLAGDD DPLIPLINMR LLAWRIPNAQ LHTIDDGHLF LITRAEAVAP IIMKFLQEER QRAVMHPRPA SGG

References

Title : Complete genome of the plant growth-promoting rhizobacterium Pseudomonas putida BIRD-1 - Matilla_2011_J.Bacteriol_193_1290
Author(s) : Matilla MA , Pizarro-Tobias P , Roca A , Fernandez M , Duque E , Molina L , Wu X , van der Lelie D , Gomez MJ , Segura A , Ramos JL
Ref : Journal of Bacteriology , 193 :1290 , 2011
Abstract : Matilla_2011_J.Bacteriol_193_1290
ESTHER : Matilla_2011_J.Bacteriol_193_1290
PubMedSearch : Matilla_2011_J.Bacteriol_193_1290
PubMedID: 21183676
Gene_locus related to this paper: psepk-q88nk6 , psepk-q88qt0 , psepu-ESTB , psepu-PHAC1 , psepu-PHAZ , psepu-PIP , psepu-PP1184 , psepu-PP1500 , psepu-PP3807 , psepu-PP3812 , psepu-PP4178 , psepu-PP4249 , psepu-PP4551 , psepu-PP4583 , psepu-PP4634 , psepu-PP4916 , psepu-PP5117 , psepu-PP5161 , psepu-PP5167 , psepu-PPSD , psepu-q9wwz4

Title : The influence of nitrogen limitation on mcl-PHA synthesis by two newly isolated strains of Pseudomonas sp - Ciesielski_2010_J.Ind.Microbiol.Biotechnol_37_511
Author(s) : Ciesielski S , Mozejko J , Przybylek G
Ref : J Ind Microbiol Biotechnol , 37 :511 , 2010
Abstract : Ciesielski_2010_J.Ind.Microbiol.Biotechnol_37_511
ESTHER : Ciesielski_2010_J.Ind.Microbiol.Biotechnol_37_511
PubMedSearch : Ciesielski_2010_J.Ind.Microbiol.Biotechnol_37_511
PubMedID: 20204456
Gene_locus related to this paper: pseme-PHAC1 , pseme-PHAC2 , pseme-PHAZ , psepu-PHAC1 , psepu-PHAZ

Title : Biochemical evidence that phaZ gene encodes a specific intracellular medium chain length polyhydroxyalkanoate depolymerase in Pseudomonas putida KT2442: characterization of a paradigmatic enzyme - de Eugenio_2007_J.Biol.Chem_282_4951
Author(s) : de Eugenio LI , Garci AP , Luengo JM , Sanz JSM , Roma NJ , Garci AJ , Prieto MAA
Ref : Journal of Biological Chemistry , 282 :4951 , 2007
Abstract : de Eugenio_2007_J.Biol.Chem_282_4951
ESTHER : de Eugenio_2007_J.Biol.Chem_282_4951
PubMedSearch : de Eugenio_2007_J.Biol.Chem_282_4951
PubMedID: 17170116
Gene_locus related to this paper: psepu-PHAZ

Title : Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila - Vodovar_2006_Nat.Biotechnol_24_673
Author(s) : Vodovar N , Vallenet D , Cruveiller S , Rouy Z , Barbe V , Acosta C , Cattolico L , Jubin C , Lajus A , Segurens B , Vacherie B , Wincker P , Weissenbach J , Lemaitre B , Medigue C , Boccard F
Ref : Nat Biotechnol , 24 :673 , 2006
Abstract : Vodovar_2006_Nat.Biotechnol_24_673
ESTHER : Vodovar_2006_Nat.Biotechnol_24_673
PubMedSearch : Vodovar_2006_Nat.Biotechnol_24_673
PubMedID: 16699499
Gene_locus related to this paper: pseae-PA1622 , psee4-q1i2k0 , psee4-q1i3a7 , psee4-q1i3n8 , psee4-q1i4y6 , psee4-q1i4z6 , psee4-q1i5s3 , psee4-q1i5s9 , psee4-q1i6r6 , psee4-q1i9a0 , psee4-q1i9c3 , psee4-q1i9h5 , psee4-q1i9t2 , psee4-q1iaa7 , psee4-q1ibu9 , psee4-q1icm5 , psee4-q1idp8 , psee4-q1idv7 , psee4-q1ie27 , psee4-q1ie44 , psee4-q1ifj6 , psee4-q1ifn8 , psee4-q1ig13 , psee4-q1ige4 , psep1-a5wax1 , psepg-b0kir7 , psepk-q88nk6 , psepu-METX , psepu-PHAZ , psepu-PIP , psepu-PP1617 , psepu-PP4178 , psepu-PP4551 , psee4-q1icg3

Title : Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440 - Nelson_2002_Environ.Microbiol_4_799
Author(s) : Nelson KE , Weinel C , Paulsen IT , Dodson RJ , Hilbert H , Martins dos Santos VA , Fouts DE , Gill SR , Pop M , Holmes M , Brinkac L , Beanan M , DeBoy RT , Daugherty S , Kolonay J , Madupu R , Nelson W , White O , Peterson J , Khouri H , Hance I , Chris Lee P , Holtzapple E , Scanlan D , Tran K , Moazzez A , Utterback T , Rizzo M , Lee K , Kosack D , Moestl D , Wedler H , Lauber J , Stjepandic D , Hoheisel J , Straetz M , Heim S , Kiewitz C , Eisen JA , Timmis KN , Dusterhoft A , Tummler B , Fraser CM
Ref : Environ Microbiol , 4 :799 , 2002
Abstract : Nelson_2002_Environ.Microbiol_4_799
ESTHER : Nelson_2002_Environ.Microbiol_4_799
PubMedSearch : Nelson_2002_Environ.Microbiol_4_799
PubMedID: 12534463
Gene_locus related to this paper: psep1-a5wa77 , psep1-a5wax1 , psepk-q88nk6 , psepk-q88qt0 , psepu-acoc , psepu-BIOH , psepu-bpest , psepu-ESTB , psepu-LIP , psepu-METX , psepu-PHAC1 , psepu-PHAC2 , psepu-PHAG , psepu-PHAZ , psepu-PIP , psepu-PP0375 , psepu-PP0498 , psepu-PP0532 , psepu-PP1064 , psepu-PP1184 , psepu-PP1310 , psepu-PP1500 , psepu-PP1617 , psepu-PP1829 , psepu-PP1979 , psepu-PP2083 , psepu-PP2201 , psepu-PP2236 , psepu-PP2567 , psepu-PP2804 , psepu-PP2934 , psepu-PP3195 , psepu-PP3367 , psepu-PP3404 , psepu-PP3645 , psepu-PP3807 , psepu-PP3812 , psepu-PP3943 , psepu-PP4164 , psepu-PP4165 , psepu-PP4178 , psepu-PP4249 , psepu-PP4540 , psepu-PP4551 , psepu-PP4583 , psepu-PP4624 , psepu-PP4634 , psepu-PP4916 , psepu-PP5117 , psepu-PP5161 , psepu-PP5167 , psepu-PPSD , psepu-Q8KQK1 , psepu-q9wwz4

Title : Novel Biodegradable Aromatic Plastics from a Bacterial Source. Genetic and biochemical studies on a route of the phenylacetyl-coa catabolon - Garcia_1999_J.Biol.Chem_274_29228
Author(s) : Garcia B , Olivera ER , Minambres B , Fernandez-Valverde M , Canedo LM , Prieto MA , Garcia JL , Martinez M , Luengo JM
Ref : Journal of Biological Chemistry , 274 :29228 , 1999
Abstract : Garcia_1999_J.Biol.Chem_274_29228
ESTHER : Garcia_1999_J.Biol.Chem_274_29228
PubMedSearch : Garcia_1999_J.Biol.Chem_274_29228
PubMedID: 10506180
Gene_locus related to this paper: psepu-PHAC1 , psepu-PHAC2 , psepu-PHAZ