Gene_Locus Report

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Gene_locus Report for: psepu-PP4624

Pseudomonas putida (strains KT2440; F1 / ATCC 700007; GB-1) hydrolase, alpha/beta fold family Ppueh

Relationship
Family|MEST-like
Block| X
Position in NCBI Life Tree|Pseudomonas putida
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Pseudomonadales: N E > Pseudomonadaceae: N E > Pseudomonas: N E > Pseudomonas putida group: N E > Pseudomonas putida: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 2 more: AE016791, CP000926, CP000712
2 UniProt : B0KGU9, A5W8Z4
3 UniProt : Q88E44, B0KGU9, A5W8Z4
3 Interpro : Q88E44, B0KGU9, A5W8Z4
3 Pfam : Q88E44, B0KGU9, A5W8Z4
3 PIRSF : Q88E44, B0KGU9, A5W8Z4
3 SUPERFAM : Q88E44, B0KGU9, A5W8Z4
Sequence
Graphical view for this peptide sequence: psepu-PP4624
Colored MSA for MEST-like (raw)
MAEIPLCVWRTRAQSFMFRGQSIRYWTAGQGEPLLLLHGFPTASWDWHYL
WGPLSQRFRVIACDMLGFGDSDKPVDHTYSLMEQADLQQALLVHLQVAQP
VHLLAHDYGGSVAQELLARHHEQRADIASCVFLNSGLFPESCRMLLIQKL
LLSRFGWLVGRSFGRDDLVRNVMQVYGPCTHPSESALDDFWSLIAANRGT
RILHKLVGYMPERRLHRERWVGAMQRKGVPLRLINGVVDPLSGAHMLERY
RQLVPEPDTVQLLGIGHYPHTEAPVQVLRHYLAFREQPLSFYPPKVAWS
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MAEIPLCVWRTRAQSFMFRGQSIRYWTAGQGEPLLLLHGFPTASWDWHYL
WGPLSQRFRVIACDMLGFGDSDKPVDHTYSLMEQADLQQALLVHLQVAQP
VHLLAHDYGGSVAQELLARHHEQRADIASCVFLNSGLFPESCRMLLIQKL
LLSRFGWLVGRSFGRDDLVRNVMQVYGPCTHPSESALDDFWSLIAANRGT
RILHKLVGYMPERRLHRERWVGAMQRKGVPLRLINGVVDPLSGAHMLERY
RQLVPEPDTVQLLGIGHYPHTEAPVQVLRHYLAFREQPLSFYPPKVAWS


References
    Title: Diversity and biocatalytic potential of epoxide hydrolases identified by genome analysis
    van Loo B, Kingma J, Arand M, Wubbolts MG, Janssen DB
    Ref: Applied Environmental Microbiology, 72:2905, 2006 : PubMed

            

    Title: Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440
    Nelson KE, Weinel C, Paulsen IT, Dodson RJ, Hilbert H, Martins dos Santos VA, Fouts DE, Gill SR, Pop M and Fraser CM <33 more author(s)>
    Ref: Environ Microbiol, 4:799, 2002 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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