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Gene_locus Report for: pyrab-PAB0762

Pyrococcus abyssi prolyl endopeptidase

Relationship
Family|S9N_PPCE_Peptidase_S9
Block| X
Position in NCBI Life Tree|Pyrococcus abyssi
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Archaea: N E > Euryarchaeota: N E > Thermococci: N E > Thermococcales: N E > Thermococcaceae: N E > Pyrococcus: N E > Pyrococcus abyssi: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AJ248286
1 UniProt : Q9UZJ9
1 Interpro : Q9UZJ9
1 Pfam : Q9UZJ9
1 PIRSF : Q9UZJ9
1 SUPERFAM : Q9UZJ9
Sequence
Graphical view for this peptide sequence: pyrab-PAB0762
Colored MSA for S9N_PPCE_Peptidase_S9 (raw)
MEDPYIWMENLQDERVLKIVEEENRRFRELVGELSDKLFPEVWEYFSQPS
IGMARITKRGIIVSYSEKDRVTVRWLGGEVIVDSKELEKELNDEVLLQGF
TTDEDGKRLAYSFSIGGSDEGITRIIDLETGELLEEIKPSVWNIVFLDKG
YYFARFYRKEKTPDGVNPPAERIFWKDEEGERMVFGEGLTSGYFMSLRKS
TDGKFAMLTLTYGWNKAEIYLGPIDKPEEWKKVYSADVPAEPIDVIDGKL
YILTKEGKGLGKVIAVKDSEVEEIIPEGEFPLEWAVIVKDKILAGRLVHA
SHKLEVYNLKGEKISEVEFDFPGSLYPLDKDDERALLRYTSFTVPYRIYE
FKDELKIVEERKVEGNFKVEEDFAISKDGTRVHYFIVKGEKDEKKAWVFG
YGGFNISLTPRFFPQVIPFLKRGGIFVMANLRGGSEYGEEWHRAGMRENK
QNVFDDFIAVLEKLKKEGYKVAAWGRSNGGLLVSATLVQRPDVMDVALIG
YPVIDMLRFHKLYIGSVWIPEYGNPDDPKDREFLLKYSPYHNVRPQEYPP
TLIYTGLHDDRVHPAHALKFFMKLKEVNAPVYLRVETKSGHMGASPETRA
RELTDLLAFVLLHL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MEDPYIWMENLQDERVLKIVEEENRRFRELVGELSDKLFPEVWEYFSQPS
IGMARITKRGIIVSYSEKDRVTVRWLGGEVIVDSKELEKELNDEVLLQGF
TTDEDGKRLAYSFSIGGSDEGITRIIDLETGELLEEIKPSVWNIVFLDKG
YYFARFYRKEKTPDGVNPPAERIFWKDEEGERMVFGEGLTSGYFMSLRKS
TDGKFAMLTLTYGWNKAEIYLGPIDKPEEWKKVYSADVPAEPIDVIDGKL
YILTKEGKGLGKVIAVKDSEVEEIIPEGEFPLEWAVIVKDKILAGRLVHA
SHKLEVYNLKGEKISEVEFDFPGSLYPLDKDDERALLRYTSFTVPYRIYE
FKDELKIVEERKVEGNFKVEEDFAISKDGTRVHYFIVKGEKDEKKAWVFG
YGGFNISLTPRFFPQVIPFLKRGGIFVMANLRGGSEYGEEWHRAGMRENK
QNVFDDFIAVLEKLKKEGYKVAAWGRSNGGLLVSATLVQRPDVMDVALIG
YPVIDMLRFHKLYIGSVWIPEYGNPDDPKDREFLLKYSPYHNVRPQEYPP
TLIYTGLHDDRVHPAHALKFFMKLKEVNAPVYLRVETKSGHMGASPETRA
RELTDLLAFVLLHL


Reference
    Title: An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi
    Cohen GN, Barbe V, Flament D, Galperin M, Heilig R, Lecompte O, Poch O, Prieur D, Querellou J and Forterre P <5 more author(s)>
    Ref: Molecular Microbiology, 47:1495, 2003 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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