Gene_Locus Report

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Gene_locus Report for: rabit-g1td52

Oryctolagus cuniculus (Rabbit) Uncharacterized protein

Relationship
Family|Neuroligin
Block| C
Position in NCBI Life Tree|Oryctolagus cuniculus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Euarchontoglires: N E > Glires: N E > Lagomorpha: N E > Leporidae: N E > Oryctolagus: N E > Oryctolagus cuniculus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AAGW02024270
1 UniProt : G1TD52
1 UniProt : G1TD52
1 Interpro : G1TD52
1 Prodom : G1TD52
1 Pfam : G1TD52
1 PIRSF : G1TD52
1 SUPERFAM : G1TD52
Sequence
Graphical view for this peptide sequence: rabit-g1td52
Colored MSA for Neuroligin (raw)
AGLPLPLLPLLSGPAPVLWLAALSIHVAVMDGQAQGPVVSTNYGKVRGLR
ATLPGEVLGPVDQFLGVPYAAPPTGERRFQPPEPPSSWAGVRNATRFPAV
CPQHLDEASLLHDMLPVWFTANLDSLAAYLQDQSEDCLYLNLYVPAEKPI
LKGSRSLGPPGSRRCQRGGSHTRKNADEINNSERLEEPEDAREQGGRKPV
MVYIHGGSYLEGSGNMMDGSVLASYGDVIVITLNYRLGVLGFLSTGDQAA
KGNYGLLDQIQALRWVEENVGAFGGDPKRVTVFGSGAGASCVSLLTLSHY
SEGLFQKAIIQSGTALSSWAVNYQPAKSTRLLAERLGCGAGGDSAALVRC
LRAREAEELVRQPGAVAPAPYHVAFGPVIDGDVIPDDPQILMEQGEFLNY
DILLGVNQGEGLRFVAVDDVDVADVDFDGSVAAFVDRLYGAPGGRDALRE
TVKFMYTDWADRHDPEARRKTLVALFTDHQWVAPAVATADLHARYGSPTY
FYAFYHRCHTDTRPAWAADAAHGDEVPYVFGVPLLGPADLFACNFSRNDV
MLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEAVAWAKYSPREQ
LYLHIGLRPRVRDHYRATKVAFWLELVPHLHGLRELLQDASPTPTSIGAR
RSAGHAWPHFQDGGQDGTPIGARRSASNAWPGIQDAAAVLIETRRDYAAE
LSVTLAVGASLLFLNVVAFAALYYKRDRRRRVSQRRGGGADGGHAHRRDA
SHTPKDVAAAAAPCHSQDALRLGCPPDYALALRRAPEDPPPGAPSTITRG
GGSGQGVSSLPHGHSTTRV
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

AGLPLPLLPLLSGPAPVLWLAALSIHVAVMDGQAQGPVVSTNYGKVRGLR
ATLPGEVLGPVDQFLGVPYAAPPTGERRFQPPEPPSSWAGVRNATRFPAV
CPQHLDEASLLHDMLPVWFTANLDSLAAYLQDQSEDCLYLNLYVPAEKPI
LKGSRSLGPPGSRRCQRGGSHTRKNADEINNSERLEEPEDAREQGGRKPV
MVYIHGGSYLEGSGNMMDGSVLASYGDVIVITLNYRLGVLGFLSTGDQAA
KGNYGLLDQIQALRWVEENVGAFGGDPKRVTVFGSGAGASCVSLLTLSHY
SEGLFQKAIIQSGTALSSWAVNYQPAKSTRLLAERLGCGAGGDSAALVRC
LRAREAEELVRQPGAVAPAPYHVAFGPVIDGDVIPDDPQILMEQGEFLNY
DILLGVNQGEGLRFVAVDDVDVADVDFDGSVAAFVDRLYGAPGGRDALRE
TVKFMYTDWADRHDPEARRKTLVALFTDHQWVAPAVATADLHARYGSPTY
FYAFYHRCHTDTRPAWAADAAHGDEVPYVFGVPLLGPADLFACNFSRNDV
MLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEAVAWAKYSPREQ
LYLHIGLRPRVRDHYRATKVAFWLELVPHLHGLRELLQDASPTPTSIGAR
RSAGHAWPHFQDGGQDGTPIGARRSASNAWPGIQDAAAVLIETRRDYAAE
LSVTLAVGASLLFLNVVAFAALYYKRDRRRRVSQRRGGGADGGHAHRRDA
SHTPKDVAAAAAPCHSQDALRLGCPPDYALALRRAPEDPPPGAPSTITRG
GGSGQGVSSLPHGHSTTRV



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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