Gene_Locus Report

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Gene_locus Report for: rhopa-q37lc6

Rhodopseudomonas palustris BisB5 terminal

Relationship
Family|PhaC_cen_dom
Block| X
Position in NCBI Life Tree|Rhodopseudomonas palustris BisB5
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Rhizobiales: N E > Bradyrhizobiaceae: N E > Rhodopseudomonas: N E > Rhodopseudomonas palustris: N E > Rhodopseudomonas palustris BisB5: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : AAKZ01000003, WP_011501770, ABE38586
1 UniProt : Q13BF3
1 Interpro : Q13BF3
1 Pfam : Q13BF3
1 PIRSF : Q13BF3
1 SUPERFAM : Q13BF3
Sequence
Graphical view for this peptide sequence: rhopa-q37lc6
Colored MSA for PhaC_cen_dom (raw)
MLQTPSNPIAVAPQAPVRHVGSTDSDRSLHAALAPLTGGLSPTALSLAYA
DWLSHLFWAPARRLDLAQDALRGAAQLAQAAVHPAPPWSLITPQPQDRRF
AGPEWRQPPFNLMAQSFLLAEEWWRDATTGIRGVSQQNAKIVEFAMRQML
DVFAPSNFALTNPEVIRRTLTSEGGNVTAGLRNWWEDLLQTMSHDTDLKH
DFEVGRDVAVTPGKVVYSNDLIELIQYAPATGEVRPEPILIVPAWIMKYY
ILDLSPHNSLVKYLTEQGFTVFMVSWRNPTAKHRDLTLEDYRRLGVMAAI
ETIRAIVPHQPIHAVGYCLGGTLLSIAAAAMSRDGDDRLRSITLFAAQTD
FTEAGELTLFINESQVAFLEDMMWKRGVLDTTQMAGAFQILRSNDLVWSR
MVRDYLMGERSEPNDLMAWNADATRMPYRMHSEYLRKLFLDNDLAEGRYT
VDDRAIALSDIHTPMFVVGTLRDHVAPWRSTFKIHLLADAEITFCLTGGG
HNAGIVSPPSPKAHGYQVMMKEADGPYIGPDDWIKEAPHAEGSWWTEWVH
WLEARSGQPVPPPRIGLPDTNAAELPDAPGHYVLQA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MLQTPSNPIAVAPQAPVRHVGSTDSDRSLHAALAPLTGGLSPTALSLAYA
DWLSHLFWAPARRLDLAQDALRGAAQLAQAAVHPAPPWSLITPQPQDRRF
AGPEWRQPPFNLMAQSFLLAEEWWRDATTGIRGVSQQNAKIVEFAMRQML
DVFAPSNFALTNPEVIRRTLTSEGGNVTAGLRNWWEDLLQTMSHDTDLKH
DFEVGRDVAVTPGKVVYSNDLIELIQYAPATGEVRPEPILIVPAWIMKYY
ILDLSPHNSLVKYLTEQGFTVFMVSWRNPTAKHRDLTLEDYRRLGVMAAI
ETIRAIVPHQPIHAVGYCLGGTLLSIAAAAMSRDGDDRLRSITLFAAQTD
FTEAGELTLFINESQVAFLEDMMWKRGVLDTTQMAGAFQILRSNDLVWSR
MVRDYLMGERSEPNDLMAWNADATRMPYRMHSEYLRKLFLDNDLAEGRYT
VDDRAIALSDIHTPMFVVGTLRDHVAPWRSTFKIHLLADAEITFCLTGGG
HNAGIVSPPSPKAHGYQVMMKEADGPYIGPDDWIKEAPHAEGSWWTEWVH
WLEARSGQPVPPPRIGLPDTNAAELPDAPGHYVLQA



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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