Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: rhort-q2rqb7

Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) virulence protein precursor

Relationship
Family|VirJ
Block| X
Position in NCBI Life Tree|Rhodospirillum rubrum
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Rhodospirillales: N E > Rhodospirillaceae: N E > Rhodospirillum: N E > Rhodospirillum rubrum: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP000230
1 UniProt : Q2RQB7
1 UniProt : Q2RQB7
1 Interpro : Q2RQB7
1 Pfam : Q2RQB7
1 PIRSF : Q2RQB7
1 SUPERFAM : Q2RQB7
Sequence
Graphical view for this peptide sequence: rhort-q2rqb7
Colored MSA for VirJ (raw)
MIRLRIIVPLVALTLLGIGFAATHTKQFTTGSLPDPKIEMPKGPQNALVV
LISDAQGWSDEDDRLSARLKDSGSVVVGIDLPRYLAILEKDPEDCVYLVG
DIEELSQEVQKAAGGSAYVLPVIAGSGEGADLALAMAAQTPDATIGHTLA
VDPTGGLPLKKILCTDAPHRTTTAGIAYGLQTGPVPNPIDTLFTPAAPAP
GRDHVASLRETWGAITATETTQPAKAALETALMALLTDPSAKTKDAWATE
LPTTATRDTLAIVYSGDGGWRDLDKEIADEFQKRGVPTLGVDSLRAFWSR
KTPEETAKTLSRLINTYTRRWQVNKVLLVGYSFGADILPATLAALPEADR
ARITQISLLGFSTEANFEISVTGWFGAKHGESQPTLPDLAKLDPAQIQCF
YGLEEDDSACPKLKDSGIEILSTTGGHHFDGDYKALATRILAGLDRRAAL
AEAEGK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MIRLRIIVPLVALTLLGIGFAATHTKQFTTGSLPDPKIEMPKGPQNALVV
LISDAQGWSDEDDRLSARLKDSGSVVVGIDLPRYLAILEKDPEDCVYLVG
DIEELSQEVQKAAGGSAYVLPVIAGSGEGADLALAMAAQTPDATIGHTLA
VDPTGGLPLKKILCTDAPHRTTTAGIAYGLQTGPVPNPIDTLFTPAAPAP
GRDHVASLRETWGAITATETTQPAKAALETALMALLTDPSAKTKDAWATE
LPTTATRDTLAIVYSGDGGWRDLDKEIADEFQKRGVPTLGVDSLRAFWSR
KTPEETAKTLSRLINTYTRRWQVNKVLLVGYSFGADILPATLAALPEADR
ARITQISLLGFSTEANFEISVTGWFGAKHGESQPTLPDLAKLDPAQIQCF
YGLEEDDSACPKLKDSGIEILSTTGGHHFDGDYKALATRILAGLDRRAAL
AEAEGK



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer