Gene_Locus Report

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Gene_locus Report for: schma-g4vhz1

Schistosoma mansoni (Blood fluke) Family S10 unassigned peptidase (S10 family)

Relationship
Family|Carboxypeptidase_S10
Block| X
Position in NCBI Life Tree|Schistosoma mansoni
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Platyhelminthes: N E > Trematoda: N E > Digenea: N E > Strigeidida: N E > Schistosomatoidea: N E > Schistosomatidae: N E > Schistosoma: N E > Schistosoma mansoni: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : HE601627
Sequence
Graphical view for this peptide sequence: schma-g4vhz1
Colored MSA for Carboxypeptidase_S10 (raw)
MESLFKMAFGSFHFELWFLVMHYRVLLFSHIFLVIILLNDTSASLKHRDR
VQSLPGIWPVPTFNQFSGYLNGSTDNIQLHYWLVEAVFKPEEAPLVLWLN
GGPGCSSMEGLFTENGPYNMIQGTSLVHNPYSWNKLANVLYLEAPAGVGF
SYAVDNNITTDDDFTALNNYHALLNFLKRFPEYYQRDFYITGESYAGVYV
PLLALHVIKSTQLNLRGIAIGNPLTSYKFNDNSLLYFIKYHGLVSERIWN
DLLGHCCYNQYYSHCMFTEISSDKCQHLIDYILNNSTYGLNIYNLYDSCG
YINNTTQQNTEYLYPFSKINPSSGSFIHSDFGNLFRSNKYVQKKREKLMQ
IREKIGVKLVLPCDDDLIVSKYLNYPYVREAIHMKKGVPKTWVECSDEVM
AAYKRNYQDMIPQYKKILKSQIPILIYNGDVDMACNFIGDDWFVSNLNFK
RHDSYQRWIYKSENGKLEIGGFWKSFIHKNVKLTFATVRGAGHMVPRDKP
AAMFHLIQSFLQKQSL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MESLFKMAFGSFHFELWFLVMHYRVLLFSHIFLVIILLNDTSASLKHRDR
VQSLPGIWPVPTFNQFSGYLNGSTDNIQLHYWLVEAVFKPEEAPLVLWLN
GGPGCSSMEGLFTENGPYNMIQGTSLVHNPYSWNKLANVLYLEAPAGVGF
SYAVDNNITTDDDFTALNNYHALLNFLKRFPEYYQRDFYITGESYAGVYV
PLLALHVIKSTQLNLRGIAIGNPLTSYKFNDNSLLYFIKYHGLVSERIWN
DLLGHCCYNQYYSHCMFTEISSDKCQHLIDYILNNSTYGLNIYNLYDSCG
YINNTTQQNTEYLYPFSKINPSSGSFIHSDFGNLFRSNKYVQKKREKLMQ
IREKIGVKLVLPCDDDLIVSKYLNYPYVREAIHMKKGVPKTWVECSDEVM
AAYKRNYQDMIPQYKKILKSQIPILIYNGDVDMACNFIGDDWFVSNLNFK
RHDSYQRWIYKSENGKLEIGGFWKSFIHKNVKLTFATVRGAGHMVPRDKP
AAMFHLIQSFLQKQSL


Reference
    Title: A systematically improved high quality genome and transcriptome of the human blood fluke Schistosoma mansoni
    Protasio AV, Tsai IJ, Babbage A, Nichol S, Hunt M, Aslett MA, De Silva N, Velarde GS, Anderson TJ and Berriman M <14 more author(s)>
    Ref: PLoS Negl Trop Dis, 6:e1455, 2012 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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