Gene_Locus Report

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Gene_locus Report for: selml-d8rr00

Selaginella moellendorffii (Spikemoss), Putative uncharacterized protein

Comment
Spikemoss


Relationship
Family|Duf_1350
Block| X
Position in NCBI Life Tree|Selaginella moellendorffii
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Lycopodiopsida: N E > Selaginellales: N E > Selaginellaceae: N E > Selaginella: N E > Selaginella moellendorffii: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : XP_002973651, XP_002975706
2 UniProt : D8RR00, D8RWX5
2 Interpro : D8RR00, D8RWX5
2 Pfam : D8RR00, D8RWX5
2 PIRSF : D8RR00, D8RWX5
2 SUPERFAM : D8RR00, D8RWX5
Sequence
Graphical view for this peptide sequence: selml-d8rr00
Colored MSA for Duf_1350 (raw)
LQGAWILRPSKGDPVGVVHFVGGVFVGAAPQITYRLFLERLAERGFLIIA
TPFASGFDHLKIADETQFKFDRCIRALKEQSLESLPSFGVGHSLGALVHL
LIGSRYAVERAGNVLMSFNNKGAKQAIPLFSPVAVPMAQNLGPLLTQISN
SPTVRFGAEMAKRQLETLSPPLVKQILPLVEQLPSLYMELANGKEDFTPT
VEDATRLIRSYYGIRRNLLVRFKDDVIDETPELAKILSSSSAVSMNLDLS
VRTLSGDHARPLQQVFPEVPGVMADAVTRGSDLLASLAVGTLFEGVAKEV
GQTFGSDPASQRLRQQLLEDIENLVEEIAAWML
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

LQGAWILRPSKGDPVGVVHFVGGVFVGAAPQITYRLFLERLAERGFLIIA
TPFASGFDHLKIADETQFKFDRCIRALKEQSLESLPSFGVGHSLGALVHL
LIGSRYAVERAGNVLMSFNNKGAKQAIPLFSPVAVPMAQNLGPLLTQISN
SPTVRFGAEMAKRQLETLSPPLVKQILPLVEQLPSLYMELANGKEDFTPT
VEDATRLIRSYYGIRRNLLVRFKDDVIDETPELAKILSSSSAVSMNLDLS
VRTLSGDHARPLQQVFPEVPGVMADAVTRGSDLLASLAVGTLFEGVAKEV
GQTFGSDPASQRLRQQLLEDIENLVEEIAAWML



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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