Gene_Locus Report

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Gene_locus Report for: spaau-j7hgt5

Sparus aurata (Gilthead sea bream). Lipoprotein lipase-like protein

Relationship
Family|Lipoprotein_Lipase
Block| L
Position in NCBI Life Tree|Sparus aurata
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Actinopterygii: N E > Actinopteri: N E > Neopterygii: N E > Teleostei: N E > Osteoglossocephalai: N E > Clupeocephala: N E > Euteleosteomorpha: N E > Neoteleostei: N E > Eurypterygia: N E > Ctenosquamata: N E > Acanthomorphata: N E > Euacanthomorphacea: N E > Percomorphaceae: N E > Eupercaria: N E > Spariformes: N E > Sparidae: N E > Sparus: N E > Sparus aurata: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : JQ390609, DQ073606
2 UniProt : J7HGT5, B8K1S7
2 UniProt : J7HGT5, B8K1S7
2 Interpro : J7HGT5, B8K1S7
2 Prodom : J7HGT5, B8K1S7
2 Pfam : J7HGT5, B8K1S7
2 PIRSF : J7HGT5, B8K1S7
2 SUPERFAM : J7HGT5, B8K1S7
Sequence
Graphical view for this peptide sequence: spaau-j7hgt5
Colored MSA for Lipoprotein_Lipase (raw)
MKAWRVVFLYFLVLDALVQHVTSLEEELADSIFGNFLDPLKDLIEHKDDA
NRTVAKFSLRKPSHPDDDLCYITPGKPDSLAACTFNSSSKTFLVIHGWTL
SGMFESWVAKLVSALYEREQTANVIVVDWLNSAQNHYVVAAQNTKAVGQE
IARFIDWIEETTNMPLENIHLIGYSLGAHVAGFAGNHATNKVGRITGLDP
AGPDFEGMHAHRRLSPDDAHFVDVLHTFTRGSLGLSIGIQQPVGHVDIYP
NGGSFQPGCNLRGALERIANFGLFAITDAVKCEHERSIHLFIDSLLNEQE
AAKAYRCGSSDMFNRGMCLSCRKSRCNTVGYDISKVRKARNVQMYTKTRA
SMPFRVYHYQLKIHFSSKVNRSEMEPSLTLSLYGTNGEAENLELKLKEKI
ATNKTHSFLLVTEKDIGDLLMLKFKWEETNGWSTSSMLKMVSSWWSGDSD
GANMEVHKIRIRAGETQKKMVFCVKDPESQTYMYAVLFFGASVVS
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKAWRVVFLYFLVLDALVQHVTSLEEELADSIFGNFLDPLKDLIEHKDDA
NRTVAKFSLRKPSHPDDDLCYITPGKPDSLAACTFNSSSKTFLVIHGWTL
SGMFESWVAKLVSALYEREQTANVIVVDWLNSAQNHYVVAAQNTKAVGQE
IARFIDWIEETTNMPLENIHLIGYSLGAHVAGFAGNHATNKVGRITGLDP
AGPDFEGMHAHRRLSPDDAHFVDVLHTFTRGSLGLSIGIQQPVGHVDIYP
NGGSFQPGCNLRGALERIANFGLFAITDAVKCEHERSIHLFIDSLLNEQE
AAKAYRCGSSDMFNRGMCLSCRKSRCNTVGYDISKVRKARNVQMYTKTRA
SMPFRVYHYQLKIHFSSKVNRSEMEPSLTLSLYGTNGEAENLELKLKEKI
ATNKTHSFLLVTEKDIGDLLMLKFKWEETNGWSTSSMLKMVSSWWSGDSD
GANMEVHKIRIRAGETQKKMVFCVKDPESQTYMYAVLFFGASVVS


Reference
    Title: Effect of ration size on fillet fatty acid composition, phospholipid allostasis and mRNA expression patterns of lipid regulatory genes in gilthead sea bream (Sparus aurata)
    Benedito-Palos L, Calduch-Giner JA, Ballester-Lozano GF, Perez-Sanchez J
    Ref: British Journal of Nutrition, 109:1175, 2013 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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