Gene_Locus Report

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Gene_locus Report for: strex-PHAZ

Streptomyces exfoliatus (Streptomyces hydrogenans) poly(3-hydroxybutyrate) depolymerase

Comment
c-term Fibronectin 3 domain excluded. Extracellular dPHASCL depolymerises (catalytic domain type 2)


Relationship
Family|Esterase_phb_PHAZ
Block| X
Position in NCBI Life Tree|Streptomyces exfoliatus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Streptomycetales: N E > Streptomycetaceae: N E > Streptomyces: N E > Streptomyces exfoliatus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : U58990
1 UniProt : Q54070
1 Interpro : Q54070
1 Pfam : Q54070
1 PIRSF : Q54070
1 SUPERFAM : Q54070
Sequence
Graphical view for this peptide sequence: strex-PHAZ
Colored MSA for Esterase_phb_PHAZ (raw)
MKIRQLLVAALTAVGIAATTVGGATAAVPAPTPGSLQQYNIGSTYVSGLS
SGGFMANQMHVAYSDVFEGAGIFSAGPYDCAQNSVNTAQYACMDTFMARK
TPAQLEQLTRDRATAGKVDPVANLSGDKVWLFHGTNDSTVKAAVNDDLAT
YYRDFGADVVYDNSSASGHAWVSPLGPNSCSSTTSPYVNTCGGDPVRDML
THLLGSVNPASSSALTGKLVQFNQSGYAPGGSAGAISMGNEGFAYVPQSC
QSGASCKLMVTLHGCYQYFGLVGNALMDKAYLNEYADTNDMIVLYPQATT
MTGNPRGCWDWWGYKSADYAQKSGPQMTAVMNMARALGAG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKIRQLLVAALTAVGIAATTVGGATAAVPAPTPGSLQQYNIGSTYVSGLS
SGGFMANQMHVAYSDVFEGAGIFSAGPYDCAQNSVNTAQYACMDTFMARK
TPAQLEQLTRDRATAGKVDPVANLSGDKVWLFHGTNDSTVKAAVNDDLAT
YYRDFGADVVYDNSSASGHAWVSPLGPNSCSSTTSPYVNTCGGDPVRDML
THLLGSVNPASSSALTGKLVQFNQSGYAPGGSAGAISMGNEGFAYVPQSC
QSGASCKLMVTLHGCYQYFGLVGNALMDKAYLNEYADTNDMIVLYPQATT
MTGNPRGCWDWWGYKSADYAQKSGPQMTAVMNMARALGAG



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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