Gene_Locus Report

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Gene_locus Report for: strhe-ShHTL7

Striga hermonthica (Purple witchweed) (Buchnera hermonthica) hyposensitive to light 7

Comment
hydrolyze SL and mediate the SL-induced seed germination. The most active receptor


Relationship
Family|RsbQ-like
Block| X
Position in NCBI Life Tree|Striga hermonthica
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > asterids: N E > lamiids: N E > Lamiales: N E > Orobanchaceae: N E > Buchnereae: N E > Striga: N E > Striga hermonthica: N E


Molecular evidence
Database
No mutation
9 structures (e.g. : 5Z7Y, 5Z82, 5Z89... more)
No kinetic





5 substrates (e.g. : 1'-carba-SPL7, H-SPL7, SAM690... more)
6 inhibitors (e.g. : KK023-N1, KK023-N2, KK094... more)
2 Genbank : KR013127, ALB07162
1 UniProt : A0A0M3PNA2
>3 Structure links 6 more: 7WA8, 7SNU, 7C8L
1 UniProt : A0A0M3PNA2
1 Interpro : A0A0M3PNA2
1 Prodom : A0A0M3PNA2
1 Pfam : A0A0M3PNA2
1 PIRSF : A0A0M3PNA2
1 SUPERFAM : A0A0M3PNA2
Sequence
Graphical view for this peptide sequence: strhe-ShHTL7
Colored MSA for RsbQ-like (raw)
MSSIGLAHNVTILGSGETTVVLGHGYGTDQSVWKLLVPYLVDDYKVLLYD
HMGAGTTNPDYFDFDRYSSLEGYSYDLIAILEEFQVSKCIYVGHSMSSMA
AAVASIFRPDLFHKLVMISPTPRLINTEEYYGGFEQKVMDETLRSLDENF
KSLSLGTAPLLLACDLESAAMQEYCRTLFNMRPDIACCITRMICGLDLRP
YLGHVTVPCHIIQSSNDIMVPVAVGEYLRKNLGGPSVVEVMPTEGHLPHL
SMPEVTIPVVLRHIRQDITDH
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSSIGLAHNVTILGSGETTVVLGHGYGTDQSVWKLLVPYLVDDYKVLLYD
HMGAGTTNPDYFDFDRYSSLEGYSYDLIAILEEFQVSKCIYVGHSMSSMA
AAVASIFRPDLFHKLVMISPTPRLINTEEYYGGFEQKVMDETLRSLDENF
KSLSLGTAPLLLACDLESAAMQEYCRTLFNMRPDIACCITRMICGLDLRP
YLGHVTVPCHIIQSSNDIMVPVAVGEYLRKNLGGPSVVEVMPTEGHLPHL
SMPEVTIPVVLRHIRQDITDH


References
3 more
    Title: Molecular basis for high ligand sensitivity and selectivity of strigolactone receptors in Striga
    Wang Y, Yao R, Du X, Guo L, Chen L, Xie D, Smith SM
    Ref: Plant Physiol, 185:1411, 2021 : PubMed

            

    Title: Structural basis for specific inhibition of the highly sensitive ShHTL7 receptor
    Shahul Hameed U, Haider I, Jamil M, Kountche BA, Guo X, Zarban RA, Kim D, Al-Babili S, Arold ST
    Ref: EMBO Rep, :, 2018 : PubMed

            

    Title: Structural analysis of HTL and D14 proteins reveals the basis for ligand selectivity in Striga
    Xu Y, Miyakawa T, Nosaki S, Nakamura A, Lyu Y, Nakamura H, Ohto U, Ishida H, Shimizu T and Tanokura M <1 more author(s)>
    Ref: Nat Commun, 9:3947, 2018 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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