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Gene_locus Report for: strpu-DspB

Strongylocentrotus purpuratus (Purple sea urchin) Haloalkane dehalogenase HLD2 DspB

Relationship
Family|Haloalkane_dehalogenase-HLD2
Block| X
Position in NCBI Life Tree|Strongylocentrotus purpuratus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Echinodermata: N E > Eleutherozoa: N E > Echinozoa: N E > Echinoidea: N E > Euechinoidea: N E > Echinacea: N E > Echinoida: N E > Strongylocentrotidae: N E > Strongylocentrotus: N E > Strongylocentrotus purpuratus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : XP_792159
1 UniProt : A0A7M7RGT6
1 UniProt : A0A7M7RGT6
1 Interpro : A0A7M7RGT6
1 Pfam : A0A7M7RGT6
1 PIRSF : A0A7M7RGT6
1 SUPERFAM : A0A7M7RGT6
Sequence
Graphical view for this peptide sequence: strpu-DspB
Colored MSA for Haloalkane_dehalogenase-HLD2 (raw)
MFGKMAFRSIGRLQTVVGHLQYGPASSGQLVARPAAAMGSRNQSTIPLVT
ADEWWGKCKKVDVLGEKMSYYDSDPQNSSSKHAVVFLHGNPTSSYLWRNV
MPQVEPIARCLAPDLIGQGRSNKLANHSYRFVDHYRYLSAWFDSVNLPEK
VSIVCHDWGSGLGFHWCNEHRDRIEGLIHMESVVAPVPGWDRFPDMAKDF
FQVLRSEAGDDLVLQKNYFIELLLPRAIMRELRPEEMEAYREPFKNPGED
RRPTLTWPREIPIKGDGPDDVIAIASSYNAWLKESADLPKLYIHAKPGFF
SEGIKKGIANWPNQKTVESEGLHFLQEDSPIQIGDHVKDFLSVLYK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MFGKMAFRSIGRLQTVVGHLQYGPASSGQLVARPAAAMGSRNQSTIPLVT
ADEWWGKCKKVDVLGEKMSYYDSDPQNSSSKHAVVFLHGNPTSSYLWRNV
MPQVEPIARCLAPDLIGQGRSNKLANHSYRFVDHYRYLSAWFDSVNLPEK
VSIVCHDWGSGLGFHWCNEHRDRIEGLIHMESVVAPVPGWDRFPDMAKDF
FQVLRSEAGDDLVLQKNYFIELLLPRAIMRELRPEEMEAYREPFKNPGED
RRPTLTWPREIPIKGDGPDDVIAIASSYNAWLKESADLPKLYIHAKPGFF
SEGIKKGIANWPNQKTVESEGLHFLQEDSPIQIGDHVKDFLSVLYK


Reference
    Title: Functional and Mechanistic Characterization of an Enzyme Family Combining Bioinformatics and High-Throughput Microfluidics
    Vasina M, Vanacek P, Hon J, Kovar D, Faldynova H, Kunka A, Badenhorst C, Buryska T, Mazurenko S and Prokop Z <5 more author(s)>
    Ref: ResearchSquare, :, 2021 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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