Gene_Locus Report

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Gene_locus Report for: strt1-q5lz16

Streptococcus thermophilus, Streptococcus vestibularis, Streptococcus sp. , Streptococcus salivarius, Streptococcus infantarius, hypothetical protein

Comment
Other strains: Streptococcus thermophilus (strains CNRZ 1066; ATCC BAA-250 / LMG 18311; ND03; ATCC BAA-491 / LMD-9), Streptococcus vestibularis (strains: ATCC 49124; F0396), Streptococcus sp. C150, Streptococcus salivarius SK126, Streptococcus infantarius subsp. infantarius ATCC BAA-102


Relationship
Family|Duf_915
Block| X
Position in NCBI Life Tree|Streptococcus thermophilus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Lactobacillales: N E > Streptococcaceae: N E > Streptococcus: N E > Streptococcus thermophilus: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : CP000024, CP000023
>3 UniProt links 1 more: Q5M3M8, E8KUA0, E3CS02
>3 UniProt links 1 more: Q5M3M8, E8KUA0, E3CS02
>3 Interpro links 1 more: Q5M3M8, E8KUA0, E3CS02
>3 Prodom links 1 more: Q5M3M8, E8KUA0, E3CS02
>3 Pfam links 1 more: Q5M3M8, E8KUA0, E3CS02
>3 PIRSF links 1 more: Q5M3M8, E8KUA0, E3CS02
>3 SUPERFAM links 1 more: Q5M3M8, E8KUA0, E3CS02
Sequence
Graphical view for this peptide sequence: strt1-q5lz16
Colored MSA for Duf_915 (raw)
MKLNKKTKLVFILVALFLIGLAVPSYSWTRKNVKEIETFYNSKLSPIIMI
PGSSATENRFDGLVRKLNQDRRGTKHSLLKVKVWNNGRITFEGKIRKNDN
EPIIVIGFENNKDGYSNIKKQAKMMNQAFEALQNKYNFNNFKGLAHSNGG
LIYTAFIENDLSDYDVKINSLMTIGTPYNFTETNIKNKSVMLADFIAAKE
NIPSTLHVYSVAGTITYDSDELVPDASVSAGKYIYQNQAKSYTEITVTGE
DAQHSDLPTNDEVVDLIKQHIEGQGLRKKQKTKLEPQ
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKLNKKTKLVFILVALFLIGLAVPSYSWTRKNVKEIETFYNSKLSPIIMI
PGSSATENRFDGLVRKLNQDRRGTKHSLLKVKVWNNGRITFEGKIRKNDN
EPIIVIGFENNKDGYSNIKKQAKMMNQAFEALQNKYNFNNFKGLAHSNGG
LIYTAFIENDLSDYDVKINSLMTIGTPYNFTETNIKNKSVMLADFIAAKE
NIPSTLHVYSVAGTITYDSDELVPDASVSAGKYIYQNQAKSYTEITVTGE
DAQHSDLPTNDEVVDLIKQHIEGQGLRKKQKTKLEPQ


References
    Title: Complete genome sequence of Streptococcus thermophilus strain ND03
    Sun Z, Chen X, Wang J, Zhao W, Shao Y, Wu L, Zhou Z, Sun T, Wang L and Chen W <2 more author(s)>
    Ref: Journal of Bacteriology, 193:793, 2011 : PubMed

            

    Title: Comparative genomics of the lactic acid bacteria
    Makarova K, Slesarev A, Wolf Y, Sorokin A, Mirkin B, Koonin E, Pavlov A, Pavlova N, Karamychev V and Mills D <40 more author(s)>
    Ref: Proc Natl Acad Sci U S A, 103:15611, 2006 : PubMed

            

    Title: Complete sequence and comparative genome analysis of the dairy bacterium Streptococcus thermophilus
    Bolotin A, Quinquis B, Renault P, Sorokin A, Ehrlich SD, Kulakauskas S, Lapidus A, Goltsman E, Mazur M and Hols P <13 more author(s)>
    Ref: Nat Biotechnol, 22:1554, 2004 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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