Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: synjb-q2jlj1

Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime) hydrolase, alpha/beta fold family

Relationship
Family|AlphaBeta_hydrolase
Block| X
Position in NCBI Life Tree|Synechococcus sp.
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Cyanobacteria/Melainabacteria group: N E > Cyanobacteria: N E > Synechococcales: N E > Synechococcaceae: N E > Synechococcus: N E > Synechococcus sp.: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP000240
1 UniProt : Q2JLJ1
1 UniProt : Q2JLJ1
1 Interpro : Q2JLJ1
1 Pfam : Q2JLJ1
1 PIRSF : Q2JLJ1
1 SUPERFAM : Q2JLJ1
Sequence
Graphical view for this peptide sequence: synjb-q2jlj1
Colored MSA for AlphaBeta_hydrolase (raw)
MPCSANANTEHRWLWRDQPIRYQQSGSTGPAVLLIHGFGASSDHWRKNLP
ELGQHCQVYAVDLLGFGGSAKPLPGSPLPYTFETWGSLVADFVREVVGQP
VYLVGNSIGCIVALQAAVLDPAQVLGVAMLDPSLRLLHERKRGQVSWLRR
RFTPLLQSLLGWPPFGRFFFAQVAQARAIRNILLQAYGRKEAVTEELIQL
LLKPALEPGAAEVFLAFVRYSQGPLAEDLLPQLTCPVLILWGEADPWEPI
ALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLDWIRDPTRKPEK
GLHSLPPEEGS
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPCSANANTEHRWLWRDQPIRYQQSGSTGPAVLLIHGFGASSDHWRKNLP
ELGQHCQVYAVDLLGFGGSAKPLPGSPLPYTFETWGSLVADFVREVVGQP
VYLVGNSIGCIVALQAAVLDPAQVLGVAMLDPSLRLLHERKRGQVSWLRR
RFTPLLQSLLGWPPFGRFFFAQVAQARAIRNILLQAYGRKEAVTEELIQL
LLKPALEPGAAEVFLAFVRYSQGPLAEDLLPQLTCPVLILWGEADPWEPI
ALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLDWIRDPTRKPEK
GLHSLPPEEGS



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer