Gene_Locus Report

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Gene_locus Report for: synsp-SLL1969

Synechocystis sp. (strains PCC 6803; ATCC 27184 / PCC 6803 / N-1) hypothetical 22.4 kda protein (pmga)

Comment
sequence L8AGL3 is the sequence from the whole genome of synechocystis strain PCC6803 into the Bacillus subtilis 168 genome


Relationship
Family|Lipase_2
Block| X
Position in NCBI Life Tree|Synechocystis sp.
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Cyanobacteria/Melainabacteria group: N E > Cyanobacteria: N E > Synechococcales: N E > Merismopediaceae: N E > Synechocystis: N E > Synechocystis sp.: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : D90905, AB004554
1 UniProt : Q7DL85
2 UniProt : P73372, Q7DL85
2 Interpro : P73372, Q7DL85
2 Pfam : P73372, Q7DL85
2 PIRSF : P73372, Q7DL85
2 SUPERFAM : P73372, Q7DL85
Sequence
Graphical view for this peptide sequence: synsp-SLL1969
Colored MSA for Lipase_2 (raw)
MVAEFPDRHPVVLVHGIYDTRAKFATMVDFLTKGGWSVHCLDLVPNDGST
SLALLAEQVKQYIDQKFAPQQPVDLIGFSMGGLVTRYYLQRLGGGERVRR
YITISAPNQGTLLGYSLPHQGVREMAWQSDFLRDLNRDCCQLLAGLQVTV
IWTPFDLMILPPSSSHLEIGQEIILPVLVHAWMVSDARCLAEVASALAKP
LP
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MVAEFPDRHPVVLVHGIYDTRAKFATMVDFLTKGGWSVHCLDLVPNDGST
SLALLAEQVKQYIDQKFAPQQPVDLIGFSMGGLVTRYYLQRLGGGERVRR
YITISAPNQGTLLGYSLPHQGVREMAWQSDFLRDLNRDCCQLLAGLQVTV
IWTPFDLMILPPSSSHLEIGQEIILPVLVHAWMVSDARCLAEVASALAKP
LP


References
    Title: Complete sequence of the first chimera genome constructed by cloning the whole genome of Synechocystis strain PCC6803 into the Bacillus subtilis 168 genome
    Watanabe S, Shiwa Y, Itaya M, Yoshikawa H
    Ref: Journal of Bacteriology, 194:7007, 2012 : PubMed

            

    Title: Mutation in a novel gene required for photomixotrophic growth leads to enhanced photoautotrophic growth of Synechocystis sp. PCC 6803
    Hihara Y, Ikeuchi M
    Ref: Photosynth Res', 53:243, 1997 : PubMed

            

    Title: Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions
    Kaneko T, Sato S, Kotani H, Tanaka A, Asamizu E, Nakamura Y, Miyajima N, Hirosawa M, Sugiura M and Tabata S <14 more author(s)>
    Ref: DNA Research, 3:109, 1996 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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