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Gene_locus Report for: takru-a0a3b5k5v8

Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). Uncharacterized protein

Relationship
Family|abh_upf0017
Block| X
Position in NCBI Life Tree|Takifugu rubripes
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Actinopterygii: N E > Actinopteri: N E > Neopterygii: N E > Teleostei: N E > Osteoglossocephalai: N E > Clupeocephala: N E > Euteleosteomorpha: N E > Neoteleostei: N E > Eurypterygia: N E > Ctenosquamata: N E > Acanthomorphata: N E > Euacanthomorphacea: N E > Percomorphaceae: N E > Eupercaria: N E > Tetraodontiformes: N E > Tetraodontoidei: N E > Tetradontoidea: N E > Tetraodontidae: N E > Takifugu: N E > Takifugu rubripes: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : XP_011606758
1 UniProt : A0A3B5K5V8
1 UniProt : A0A3B5K5V8
1 Interpro : A0A3B5K5V8
1 Pfam : A0A3B5K5V8
1 PIRSF : A0A3B5K5V8
1 SUPERFAM : A0A3B5K5V8
Sequence
Graphical view for this peptide sequence: takru-a0a3b5k5v8
Colored MSA for abh_upf0017 (raw)
MLDWALLLCIVILAVLIWPGSKYFGTESPPGALFQRQTLSQQATENKPGK
RVSDRHEKAAAVSLVCKPSALANYLLKHCRTFRNYSPFVGWTWRASALLQ
SVYEACWPCDSPVQFVRDNLQLSDDGLVALDWAVPSSQKRRRTSSHSTSP
VLLIIPNSFGKITRTVLKLCETALFHGYLPVVFNRRSHNSSPLTTVKLQQ
FGDPADLREAVRYIRYQQPSGRLYAVSESTGSGLLLSYLGECGSSSYMTA
AVCLSPVFRCQSWFEKGLCWPLQWALVVYQKICLSRYKTVLAETLQTDTL
FSSSSLCGLEESLFCLRSSAPAAFAEPGSGWDAYWEHNEPLRDVDEVAIP
VLSICACDDPVRGDTQSTIPLELFETNPHFFLLLTARGGHCGFSTQYEGS
VVRAFGAASSGAPPNTGVGNHGTNWSHKALLEFFRAATDFFAAEDRAKQL
SVRRRGLGGSISGKMFRHRSVSSCKRVPTCSHNIHAIYNWQRSYTR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MLDWALLLCIVILAVLIWPGSKYFGTESPPGALFQRQTLSQQATENKPGK
RVSDRHEKAAAVSLVCKPSALANYLLKHCRTFRNYSPFVGWTWRASALLQ
SVYEACWPCDSPVQFVRDNLQLSDDGLVALDWAVPSSQKRRRTSSHSTSP
VLLIIPNSFGKITRTVLKLCETALFHGYLPVVFNRRSHNSSPLTTVKLQQ
FGDPADLREAVRYIRYQQPSGRLYAVSESTGSGLLLSYLGECGSSSYMTA
AVCLSPVFRCQSWFEKGLCWPLQWALVVYQKICLSRYKTVLAETLQTDTL
FSSSSLCGLEESLFCLRSSAPAAFAEPGSGWDAYWEHNEPLRDVDEVAIP
VLSICACDDPVRGDTQSTIPLELFETNPHFFLLLTARGGHCGFSTQYEGS
VVRAFGAASSGAPPNTGVGNHGTNWSHKALLEFFRAATDFFAAEDRAKQL
SVRRRGLGGSISGKMFRHRSVSSCKRVPTCSHNIHAIYNWQRSYTR


Reference
    Title: Integration of the genetic map and genome assembly of fugu facilitates insights into distinct features of genome evolution in teleosts and mammals
    Kai W, Kikuchi K, Tohari S, Chew AK, Tay A, Fujiwara A, Hosoya S, Suetake H, Naruse K and Venkatesh B <2 more author(s)>
    Ref: Genome Biol Evol, 3:424, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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