takru-nlgn3a

 
Takifugu rubripes (Japanese pufferfish) (Fugu rubripes) Neuroligin 3a

Relationship
Family Neuroligin
Block C
Takifugu rubripes position in NCBI Life Tree :
N link to NCBI taxonomic web page and E link to ESTHER gene locus found in this strain.
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Actinopterygii: N E > Actinopteri: N E > Neopterygii: N E > Teleostei: N E > Osteoglossocephalai: N E > Clupeocephala: N E > Euteleosteomorpha: N E > Neoteleostei: N E > Eurypterygia: N E > Ctenosquamata: N E > Acanthomorphata: N E > Euacanthomorphacea: N E > Percomorphaceae: N E > Eupercaria: N E > Tetraodontiformes: N E > Tetraodontoidei: N E > Tetradontoidea: N E > Tetraodontidae: N E > Takifugu: N E > Takifugu rubripes: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic



1 Genbank : GQ489200
2 UniProt : D2X2G9, H2TA38
2 UniProtTrembl : D2X2G9, H2TA38
2 Interpro : D2X2G9, H2TA38
2 Prodom : D2X2G9, H2TA38
2 Pfam : D2X2G9, H2TA38
2 PIRSF : D2X2G9, H2TA38
2 SUPERFAM : D2X2G9, H2TA38
2 QuickSwissBlast : D2X2G9, H2TA38
 
Sequence
Graphical view for this peptide sequence: takru-nlgn3a
Colored MSA for Neuroligin (raw)
MWFSLRRSHLTSQSWHGAQSGVGLGVSFWVLSFCWCFANGQNYHPTVNTQ
YGKLRGVRVPLPSEILGPVDQYLGVPYAASPVGEKRFMPPEPPSSWSGIK
NATHFAPVCPQNIHNAVPEIMMPIWFTFNLDIVTTYIQDQHEDCLYLNIY
VPTEDVKRISKECARKPNKKMCRKGGAHAKKQGEDLSDNDGDEDEDIRDS
GAKPVMVYIHGGSYMEGTGNMIDGSVLASYGNVIVITLNYRVGVLGFLST
GDQAAKGNYGLLDQIQALRWISENIGFFGGDSNRITVFGSGIGASCVSLL
TLSHHSEGLFHRAIIQSGSALSSWAVNYQPVKYTRLLAEKVGCNVLDTLD
MVDCLRKKSFRELVEQDIQPARYHVAFGPVIDGDVIPDDPEILMEQGEFL
NYDIMLGVNQGEGLRFVENVVDSDDGVSGNDFDFSVSDFVDSLYGYPEGK
DTLRETIKFMYTDWADRDNPETRRKTLVALFTDHQWVEPSVVTADLHARY
GSPTYFYAFYHNCQSLMKPAWSDAAHGDEVPYVFGIPLIGPTDLFPCNFS
KNDAMLSVVVMTYWTNFAKTGDPNKPVPQDTKFIHTKANRFEEVAWSKYN
PQDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLYNLHDMFHYTSTTTKV
PPPEATQNTVSTKRPNGKTSWPSNTKRPPMSPAYNSEDKDSWNEDKTGPL
VVENPRDYSTELSVTIAVGASLLFLNVLAFAALYYRKDKRRQDSGHGQPS
PQHQTTANDIGHHAPEEEIMSLQMNQTHHECDAGNSNEGALRLAALPDYT
LTLRRSPDDIPLMTPNTITMIPNSLVGMPKLHPYNTFTTGFNSTGLPHSH
S
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MWFSLRRSHLTSQSWHGAQSGVGLGVSFWVLSFCWCFANGQNYHPTVNTQ
YGKLRGVRVPLPSEILGPVDQYLGVPYAASPVGEKRFMPPEPPSSWSGIK
NATHFAPVCPQNIHNAVPEIMMPIWFTFNLDIVTTYIQDQHEDCLYLNIY
VPTEDVKRISKECARKPNKKMCRKGGAHAKKQGEDLSDNDGDEDEDIRDS
GAKPVMVYIHGGSYMEGTGNMIDGSVLASYGNVIVITLNYRVGVLGFLST
GDQAAKGNYGLLDQIQALRWISENIGFFGGDSNRITVFGSGIGASCVSLL
TLSHHSEGLFHRAIIQSGSALSSWAVNYQPVKYTRLLAEKVGCNVLDTLD
MVDCLRKKSFRELVEQDIQPARYHVAFGPVIDGDVIPDDPEILMEQGEFL
NYDIMLGVNQGEGLRFVENVVDSDDGVSGNDFDFSVSDFVDSLYGYPEGK
DTLRETIKFMYTDWADRDNPETRRKTLVALFTDHQWVEPSVVTADLHARY
GSPTYFYAFYHNCQSLMKPAWSDAAHGDEVPYVFGIPLIGPTDLFPCNFS
KNDAMLSVVVMTYWTNFAKTGDPNKPVPQDTKFIHTKANRFEEVAWSKYN
PQDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLYNLHDMFHYTSTTTKV
PPPEATQNTVSTKRPNGKTSWPSNTKRPPMSPAYNSEDKDSWNEDKTGPL
VVENPRDYSTELSVTIAVGASLLFLNVLAFAALYYRKDKRRQDSGHGQPS
PQHQTTANDIGHHAPEEEIMSLQMNQTHHECDAGNSNEGALRLAALPDYT
LTLRRSPDDIPLMTPNTITMIPNSLVGMPKLHPYNTFTTGFNSTGLPHSH
S

no DNA




References
    Title: Characterization of the neuroligin gene family expression and evolution in zebrafish
    Rissone A, Sangiorgio L, Monopoli M, Beltrame M, Zucchi I, Bussolino F, Arese M, Cotelli F
    Ref: Developmental Dynamics, 239:688, 2010 : PubMed

            

    Title: The medaka draft genome and insights into vertebrate genome evolution
    Kasahara M, Naruse K, Sasaki S, Nakatani Y, Qu W, Ahsan B, Yamada T, Nagayasu Y, Doi K and Kohara Y <28 more author(s)>
    Ref: Nature, 447:714, 2007 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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