Gene_Locus Report

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Gene_locus Report for: thema-ESTA

Thermotoga maritima, Thermotoga petrophila, Thermotoga sp., Thermotoga neapolitana, Thermotoga naphthophila, Esterase/lipase-like protein

Comment
Other strains: Thermotoga maritima (ATCC 43589 / MSB8 / DSM 3109 / JCM 10099); Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) Thermotoga sp. (strains RQ2; SG1; RQ7; Mc24; Xyl54; TBGT1766; RQ7; Cell2; TBGT1765); Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 RKU-10


Relationship
Family|CarbLipBact_2
Block| X
Position in NCBI Life Tree|Thermotoga maritima
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Thermotogae [phylum]: N E > Thermotogae [class]: N E > Thermotogales: N E > Thermotogaceae: N E > Thermotoga: N E > Thermotoga maritima: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: thema-ESTA
Colored MSA for CarbLipBact_2 (raw)
MNFPRCKTVKKSLPIFLEGGNEGVLFIHGYTGSPHDFEYMAKEVNRAGFT
VSVPRLPGHGTCGEDFLTTTARDWLRRAFDAYYDLKAICDRVYVVGLSMG
GVIALILASQMNPPKLVTLAAATHVFDKRIVLTPILKLFTKKMPCENTEK
YEDPDIEYLRKEYWSYNWPKQAAELYKLMKLARKSVSKITSATLVVAAKN
DNMVPMKAAEFIYNNIRSEKRKLLVFEKSGHVLSNDVEKEDVTRAVIEWL
KGE
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MNFPRCKTVKKSLPIFLEGGNEGVLFIHGYTGSPHDFEYMAKEVNRAGFT
VSVPRLPGHGTCGEDFLTTTARDWLRRAFDAYYDLKAICDRVYVVGLSMG
GVIALILASQMNPPKLVTLAAATHVFDKRIVLTPILKLFTKKMPCENTEK
YEDPDIEYLRKEYWSYNWPKQAAELYKLMKLARKSVSKITSATLVVAAKN
DNMVPMKAAEFIYNNIRSEKRKLLVFEKSGHVLSNDVEKEDVTRAVIEWL
KGE


References
2 more
    Title: Recombination in Thermotoga: implications for species concepts and biogeography
    Nesbo CL, Dlutek M, Doolittle WF
    Ref: Genetics, 172:759, 2006 : PubMed

            

    Title: Lateral gene transfer and phylogenetic assignment of environmental fosmid clones
    Nesbo CL, Boucher Y, Dlutek M, Doolittle WF
    Ref: Environ Microbiol, 7:2011, 2005 : PubMed

            

    Title: Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima
    Nelson KE, Clayton RA, Gill SR, Gwinn ML, Dodson RJ, Haft DH, Hickey EK, Peterson JD, Nelson WC and Fraser CM <19 more author(s)>
    Ref: Nature, 399:323, 1999 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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