Gene_locus Report for: triad-b3ru11 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein
Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Placozoa: N E > Trichoplax: N E > Trichoplax adhaerens: N E A85-EsteraseD-FGH :
triad-b3rkr2 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein .
ABHD13-BEM46 :
triad-b3sdi1 Trichoplax adhaerens (Trichoplax reptans). Hydrolase_4 domain-containing protein .
ABHD18 :
triad-b3rwp0 Trichoplax adhaerens Putative uncharacterized protein .
abh_upf0017 :
triad-b3s445 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein ,
triad-b3s449 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein .
Acidic_Lipase :
triad-b3rsh1 Trichoplax adhaerens (Trichoplax reptans) Lipase ,
triad-b3rsh3 Trichoplax adhaerens (Trichoplax reptans) Lipase .
Carboxypeptidase_S10 :
triad-b3rnj7 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein .
Carb_B_Root :
triad-b3rkc3 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3seu9 Trichoplax adhaerens Putative uncharacterized protein .
CGI-58_ABHD5_ABHD4 :
triad-b3rvc1 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein .
Cholinesterase-like :
triad-b3rka6 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3rkc4 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3rkc5 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3sa20 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3sa22 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3sa23 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3sa24 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3sa25 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3sa26 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3sa27 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3sa28 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3sa29 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3sa33 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3sa34 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3sa36 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3scd3 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3sf12 Trichoplax adhaerens Putative uncharacterized protein .
DPP4N_Peptidase_S9 :
triad-b3s8a0 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein ,
triad-b3s898 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein ,
triad-b3s899 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein .
Duf_726 :
triad-b3rl14 Trichoplax adhaerens Putative uncharacterized protein ,
triad-b3s3e9 Trichoplax adhaerens Putative uncharacterized protein .
Duf_1057 :
triad-b3rks9 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein ,
triad-b3rkt0 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein ,
triad-b3scg3 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein ,
triad-b3scg4 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein .
Epoxide_hydrolase :
triad-b3rut0 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein ,
triad-b3s705 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein ,
triad-b3s706 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein .
Haloalkane_dehalogenase-HLD2 :
triad-b3s949 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein ,
triad-b3s950 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein .
LIDHydrolase :
triad-b3s478 Trichoplax adhaerens Putative uncharacterized protein .
Maspardin-ACP33-SPG21_like :
triad-b3rrr2 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein .
MEST-like :
triad-b3rw12 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein .
Monoglyceridelipase_lysophospholip :
triad-b3rj15 Trichoplax adhaerens (Trichoplax reptans). Putative uncharacterized protein .
Neuroligin :
triad-b3sa31 Trichoplax adhaerens Putative uncharacterized protein .
NLS3-Tex30 :
triad-b3sb39 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein .
PPase_methylesterase_euk :
triad-b3rxn2 Trichoplax adhaerens (Trichoplax reptans) Protein phosphatase methylesterase 1 .
Proline_iminopeptidase :
triad-b3s1y9 Trichoplax adhaerens (Trichoplax reptans) Proline iminopeptidase ,
triad-b3rt61 Trichoplax adhaerens (Trichoplax reptans). Proline iminopeptidase ,
triad-b3rt62 Trichoplax adhaerens (Trichoplax reptans). Proline iminopeptidase .
Prolylcarboxypeptidase :
triad-b3rls2 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein ,
triad-b3rnw5 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein ,
triad-b3s9x4 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein .
S9N_PREPL_Peptidase_S9 :
triad-b3scr3 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein .
SERHL :
triad-b3ry59 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein .
Valacyclovir-hydrolase :
triad-b3rty7 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein ,
triad-b3rur2 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein ,
triad-b3rwr4 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein ,
triad-b3s3d8 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein ,
triad-b3seb0 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein ,
triad-b3seb1 Trichoplax adhaerens (Trichoplax reptans) Putative uncharacterized protein Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: triad-b3ru11 Colored MSA for DPP4N_Peptidase_S9 (raw)
MDPFTHIKLVNRQKSWEELHQTITFSRRLQYDASRVPSSFKFRSHLVGKS
DSNSQSSSPNSSISSDSSSQAVTTSHAVYQHRLYYLNFTERGHSTIYYTD
LPYTDENDEILENLSEHSAHGLPLLSDLAFITDSKLSKEEELLQERKRIR
GQGILNYCLDSKSGKIIFHLGSDLYECQDSMNEGSIPSVRKVNNESETSS
YVDPKICPYNSDLVAFIRQNDLWVTSLSTGEEKRLTYVNNENQDLKRNPL
SAGVPSFVMQEEFDRYTGYYWQPCPSVTDADGDQGLYRILYEETDESMVE
LVGINNGSNVDYYRYPRVGKPNAVARLKITEFQYVNGEFLSPIVEYELLQ
CLDDLFPNVEYLVRFGWLPDSSAVYAQIVDRMQLKSQLVVVPLSCFIPIL
IPKSASRMPSTDSHSVYVLLQEESTVWINVHNLIHFLPAGHWSEAPVGDA
MESWQFIWGSEKDGYRHLYLISFSPKLHDDDNCKVFLVKTNVRQLTSGNW
EVSKDKMWVDEKRQLIYFTGTKDNDLEKHLYVTSYGHNQFPIQRLTPPSF
SHNIFISDDFSWFVSIFSSMKTLPGVGIFHIPHTISMLNDPISNCKLMQI
LLNPKDILEPSLIPEVFSFVGSHGEKIYGVYHKPMGFVDGIKYPTILYVY
GGPGVQIITSGNTVQRLVRLQNFIQAGYVVVCMDSRGSCGRGIKFEKHIK
NAMGTIEIEDQVEGLQYLANKLNFIDLSRVAIYGWSYGGYLALMALAQQP
DMFKIAIAGAPVTDWELYDTGYTERYMSLPEFNFLGYANGSVINFRNRFP
DQPNRLLLVHGLNDENVHFTHTSTLINSLVGASKPYTLLVYPNERHGLRK
MDSREHFETSLLNFLQSHL
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
M D P F T H I K L V N R Q K S W E E L H Q T I T F S R R L Q Y D A S R V P S S F K F R S H L V G K S D S N S Q S S S P N S S I S S D S S S Q A V T T S H A V Y Q H R L Y Y L N F T E R G H S T I Y Y T D L P Y T D E N D E I L E N L S E H S A H G L P L L S D L A F I T D S K L S K E E E L L Q E R K R I R G Q G I L N Y C L D S K S G K I I F H L G S D L Y E C Q D S M N E G S I P S V R K V N N E S E T S S Y V D P K I C P Y N S D L V A F I R Q N D L W V T S L S T G E E K R L T Y V N N E N Q D L K R N P L S A G V P S F V M Q E E F D R Y T G Y Y W Q P C P S V T D A D G D Q G L Y R I L Y E E T D E S M V E L V G I N N G S N V D Y Y R Y P R V G K P N A V A R L K I T E F Q Y V N G E F L S P I V E Y E L L Q C L D D L F P N V E Y L V R F G W L P D S S A V Y A Q I V D R M Q L K S Q L V V V P L S C F I P I L I P K S A S R M P S T D S H S V Y V L L Q E E S T V W I N V H N L I H F L P A G H W S E A P V G D A M E S W Q F I W G S E K D G Y R H L Y L I S F S P K L H D D D N C K V F L V K T N V R Q L T S G N W E V S K D K M W V D E K R Q L I Y F T G T K D N D L E K H L Y V T S Y G H N Q F P I Q R L T P P S F S H N I F I S D D F S W F V S I F S S M K T L P G V G I F H I P H T I S M L N D P I S N C K L M Q I L L N P K D I L E P S L I P E V F S F V G S H G E K I Y G V Y H K P M G F V D G I K Y P T I L Y V Y G G P G V Q I I T S G N T V Q R L V R L Q N F I Q A G Y V V V C M D S R G S C G R G I K F E K H I K N A M G T I E I E D Q V E G L Q Y L A N K L N F I D L S R V A I Y G W S Y G G Y L A L M A L A Q Q P D M F K I A I A G A P V T D W E L Y D T G Y T E R Y M S L P E F N F L G Y A N G S V I N F R N R F P D Q P N R L L L V H G L N D E N V H F T H T S T L I N S L V G A S K P Y T L L V Y P N E R H G L R K M D S R E H F E T S L L N F L Q S H L
Reference
Title: The Trichoplax genome and the nature of placozoansSrivastava M , Begovic E , Chapman J , Putnam NH , Hellsten U , Kawashima T , Kuo A , Mitros T , Salamov A and Rokhsar DS <11 more author(s)> Srivastava M , Begovic E , Chapman J , Putnam NH , Hellsten U , Kawashima T , Kuo A , Mitros T , Salamov A , Carpenter ML , Signorovitch AY , Moreno MA , Kamm K , Grimwood J , Schmutz J , Shapiro H , Grigoriev IV , Buss LW , Schierwater B , Dellaporta SL , Rokhsar DS (- 11) Ref: Nature, 454 :955, 2008 : PubMed Abstract ESTHER: Srivastava_2008_Nature_454_955 PubMedSearch: Srivastava 2008 Nature 454 955 PubMedID: 18719581 Gene_locus related to this paper: triad-b3rka6 ,
triad-b3rkc3 ,
triad-b3rkc4 ,
triad-b3rkc5 ,
triad-b3rkr2 ,
triad-b3rks9 ,
triad-b3rkt0 ,
triad-b3rl14 ,
triad-b3rls2 ,
triad-b3rnj7 ,
triad-b3rnw5 ,
triad-b3rrr2 ,
triad-b3rsh1 ,
triad-b3rsh3 ,
triad-b3rty7 ,
triad-b3ru11 ,
triad-b3rur2 ,
triad-b3rut0 ,
triad-b3rvc1 ,
triad-b3rw12 ,
triad-b3rwp0 ,
triad-b3rwr4 ,
triad-b3rxn2 ,
triad-b3ry59 ,
triad-b3s1y9 ,
triad-b3s3d8 ,
triad-b3s3e9 ,
triad-b3s8a0 ,
triad-b3s9x4 ,
triad-b3s445 ,
triad-b3s449 ,
triad-b3s478 ,
triad-b3s705 ,
triad-b3s706 ,
triad-b3s898 ,
triad-b3s899 ,
triad-b3s949 ,
triad-b3s950 ,
triad-b3sa20 ,
triad-b3sa22 ,
triad-b3sa23 ,
triad-b3sa24 ,
triad-b3sa25 ,
triad-b3sa26 ,
triad-b3sa27 ,
triad-b3sa28 ,
triad-b3sa29 ,
triad-b3sa31 ,
triad-b3sa33 ,
triad-b3sa34 ,
triad-b3sa36 ,
triad-b3sb39 ,
triad-b3scd3 ,
triad-b3scg3 ,
triad-b3scg4 ,
triad-b3scr3 ,
triad-b3seb0 ,
triad-b3seb1 ,
triad-b3seu9 ,
triad-b3sf12 ,
triad-b3rt61 ,
triad-b3rt62 ,
triad-b3rj15 ,
triad-b3sdi1 Abstract
As arguably the simplest free-living animals, placozoans may represent a primitive metazoan form, yet their biology is poorly understood. Here we report the sequencing and analysis of the approximately 98 million base pair nuclear genome of the placozoan Trichoplax adhaerens. Whole-genome phylogenetic analysis suggests that placozoans belong to a 'eumetazoan' clade that includes cnidarians and bilaterians, with sponges as the earliest diverging animals. The compact genome shows conserved gene content, gene structure and synteny in relation to the human and other complex eumetazoan genomes. Despite the apparent cellular and organismal simplicity of Trichoplax, its genome encodes a rich array of transcription factor and signalling pathway genes that are typically associated with diverse cell types and developmental processes in eumetazoans, motivating further searches for cryptic cellular complexity and/or as yet unobserved life history stages.
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