Gene_Locus Report

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Gene_locus Report for: trimr-a0a0n5dhd4

Trichuris muris (Mouse whipworm) Uncharacterized protein

Comment
Mouse whipworm


Relationship
Family|Gliotactin
Block| C
Position in NCBI Life Tree|Trichuris muris
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Nematoda: N E > Enoplea: N E > Dorylaimia: N E > Trichinellida: N E > Trichuridae: N E > Trichuris: N E > Trichuris muris: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: trimr-a0a0n5dhd4
Colored MSA for Gliotactin (raw)
MHDRYIGEPLPEVDLFDPFKEKTTQSPEPSPDHVIVNIQLGRIVGTKMLI
PGLAWTPDRDPRDQMPMDQKKPDPFPLSPVNDVTIFVFLGIPYARKPIGP
LRFQPPQKVAHFEGDTIYANNLKPSCPQDVDARATLWFEEPYEHRVEEDC
LYLNVYTPQVSRSISTKYPVIVFFHGGGFQTGSSSDWPGHVLATKGVVVV
TANYRLGPLGFLSMGDHSTGNYGLMDQNLVLEWVRSYIYAFNGDVDRVTI
VGHGAGAVSVGLHMLSPMSAGLFKAAAAMSGSDLSYHQVITNTMLAYNNT
IKLGRHVGCTQAIVRDVWNCLLTRSPNDLVEGVRNMLVEYNRYAFLPVVD
GNFIPAAPEELLRKGAVPSAVPYLTGVNQNDGTEVLLSERDLARLHFIVD
NKFVEYKIMDYVLKRNFTTNREAALEAIKYLYTFWPDVRDNEATRSRFIH
MPIMFHQLARLPKCVPRQAASFTCACHECDLFLLFGFPWMPKELLPRHLR
NVYWTDSDKNMSEVFMAMWKQYSGSQNPNLPHQNLWINYGPRDHYYLDIN
VTQSLRKDYDWEHVAFWNVYLNQLSELYTTTFSPIEAAVRKELISFKATT
GVFIILCAATFTCAGTLLYLAAVERRRRRSHLNYALQMELDRSHISRKVF
GESLMNPSFFAIIDDEAARDLLNKLAIVARQYSWLLDVFMSLFATVRIED
LSFLLSPSARSNGMRVWPLSLLALRSVAFTYSLRRYPLVSVDALCPLSVG
QRNIRLPRDRLEHISPKKMHQIEILGALIGRFFTRLNILTSGVVVDAGSG
KGHLSRLLHEVYGLQVIAIDADDAVVRKSCEIDLKRTARNFAEHPPVVRL
VQRLSKQGCCSPLDVVTCV
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MHDRYIGEPLPEVDLFDPFKEKTTQSPEPSPDHVIVNIQLGRIVGTKMLI
PGLAWTPDRDPRDQMPMDQKKPDPFPLSPVNDVTIFVFLGIPYARKPIGP
LRFQPPQKVAHFEGDTIYANNLKPSCPQDVDARATLWFEEPYEHRVEEDC
LYLNVYTPQVSRSISTKYPVIVFFHGGGFQTGSSSDWPGHVLATKGVVVV
TANYRLGPLGFLSMGDHSTGNYGLMDQNLVLEWVRSYIYAFNGDVDRVTI
VGHGAGAVSVGLHMLSPMSAGLFKAAAAMSGSDLSYHQVITNTMLAYNNT
IKLGRHVGCTQAIVRDVWNCLLTRSPNDLVEGVRNMLVEYNRYAFLPVVD
GNFIPAAPEELLRKGAVPSAVPYLTGVNQNDGTEVLLSERDLARLHFIVD
NKFVEYKIMDYVLKRNFTTNREAALEAIKYLYTFWPDVRDNEATRSRFIH
MPIMFHQLARLPKCVPRQAASFTCACHECDLFLLFGFPWMPKELLPRHLR
NVYWTDSDKNMSEVFMAMWKQYSGSQNPNLPHQNLWINYGPRDHYYLDIN
VTQSLRKDYDWEHVAFWNVYLNQLSELYTTTFSPIEAAVRKELISFKATT
GVFIILCAATFTCAGTLLYLAAVERRRRRSHLNYALQMELDRSHISRKVF
GESLMNPSFFAIIDDEAARDLLNKLAIVARQYSWLLDVFMSLFATVRIED
LSFLLSPSARSNGMRVWPLSLLALRSVAFTYSLRRYPLVSVDALCPLSVG
QRNIRLPRDRLEHISPKKMHQIEILGALIGRFFTRLNILTSGVVVDAGSG
KGHLSRLLHEVYGLQVIAIDADDAVVRKSCEIDLKRTARNFAEHPPVVRL
VQRLSKQGCCSPLDVVTCV



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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