Gene_Locus Report

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Gene_locus Report for: trisp-e5s2p1

Trichinella spiralis (Trichina worm) Gastric triacylglycerol lipase

Comment
only c-term Pfam A Abhydro_lipase 80 137 Pfam A Abhydrolase_1 151 430


Relationship
Family|Acidic_Lipase
Block| X
Position in NCBI Life Tree|Trichinella spiralis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Nematoda: N E > Enoplea: N E > Dorylaimia: N E > Trichinellida: N E > Trichinellidae: N E > Trichinella: N E > Trichinella spiralis: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: trisp-e5s2p1
Colored MSA for Acidic_Lipase (raw)
GYRCEEHSVITEDGYILRLQRIPNDGHRSGKKLPVVLQHGLLQSASDWVL
NSRNHSLGFILADAGFDVWLSNVRGNVYSRRHVSLHPKSQEFWAFTIDQM
ANYDLPAIINFVLNETSAPSLHYAGHSQGTTIGFILFSERPTWSAAKHMT
SLGENVSCFCTGCLPGQHKKRPEACRSVQLPMVEMVGGYEFMPSTRFMKW
LGGKLCTGRTAFLCQNALFLFVGCDFLNFNMTRLPVYMAHTPSGTSVSNI
MHFSQMIQKGEFKKFDYGSDENTKIYNQPESPKYKVGNMLVPVVLYWGGN
DVFTVESDIMRLSAELKSTLSIHYYHDSDHVDFVWGTNMADGAYRRMLES
IDIYEN
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

GYRCEEHSVITEDGYILRLQRIPNDGHRSGKKLPVVLQHGLLQSASDWVL
NSRNHSLGFILADAGFDVWLSNVRGNVYSRRHVSLHPKSQEFWAFTIDQM
ANYDLPAIINFVLNETSAPSLHYAGHSQGTTIGFILFSERPTWSAAKHMT
SLGENVSCFCTGCLPGQHKKRPEACRSVQLPMVEMVGGYEFMPSTRFMKW
LGGKLCTGRTAFLCQNALFLFVGCDFLNFNMTRLPVYMAHTPSGTSVSNI
MHFSQMIQKGEFKKFDYGSDENTKIYNQPESPKYKVGNMLVPVVLYWGGN
DVFTVESDIMRLSAELKSTLSIHYYHDSDHVDFVWGTNMADGAYRRMLES
IDIYEN


Reference
    Title: The draft genome of the parasitic nematode Trichinella spiralis
    Mitreva M, Jasmer DP, Zarlenga DS, Wang Z, Abubucker S, Martin J, Taylor CM, Yin Y, Fulton L and Wilson RK <11 more author(s)>
    Ref: Nat Genet, 43:228, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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