Gene_Locus Report

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Gene_locus Report for: tryb9-c9zpb9

Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) Putative uncharacterized protein

Relationship
Family|abh_upf0017
Block| X
Position in NCBI Life Tree|Trypanosoma brucei gambiense
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Euglenozoa: N E > Kinetoplastida: N E > Trypanosomatidae: N E > Trypanosoma: N E > Trypanozoon: N E > Trypanosoma brucei: N E > Trypanosoma brucei gambiense: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : FN554968
1 UniProt : C9ZPB9
1 UniProt : C9ZPB9
1 Interpro : C9ZPB9
1 Pfam : C9ZPB9
1 PIRSF : C9ZPB9
1 SUPERFAM : C9ZPB9
Sequence
Graphical view for this peptide sequence: tryb9-c9zpb9
Colored MSA for abh_upf0017 (raw)
MTSLKEKVLFLLLHTLIHILVIHFWNVDRTLVDGIFGKRRRRSRGVIEVV
AHGNASKVFFSLDKVEKLFYLSPPYDGRINTVLCALRPNWPISYTREVVN
GVDDNPICLDWLIAETSERDARGILIIVPGLASWSQTNYIQRCVLLAHRY
GIHCCVFNCKGLGDTPLTTPRMISASWTGDLHKTFSTALSREALSRKFGT
AANNIWGAGFSLGGVIMSKFLKECALQGVKSQPLDAALIINSPLDMEETS
RTLNEPQNAMYQRKMISNVIQFVTKHIDVLKNVKEIDLKEHDNDILKFMK
SLRSLQEFDVHINAPHNGFATVKDFYDAVNVFTSLRHCNIPVLCLVAEDD
PVIGSLPSNAFDDVASCNKLVAFVKFPYGGHLGFCRSPMEEWNGEPSVME
MFICDLISSHKHMEEMKEPTEGICLY
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTSLKEKVLFLLLHTLIHILVIHFWNVDRTLVDGIFGKRRRRSRGVIEVV
AHGNASKVFFSLDKVEKLFYLSPPYDGRINTVLCALRPNWPISYTREVVN
GVDDNPICLDWLIAETSERDARGILIIVPGLASWSQTNYIQRCVLLAHRY
GIHCCVFNCKGLGDTPLTTPRMISASWTGDLHKTFSTALSREALSRKFGT
AANNIWGAGFSLGGVIMSKFLKECALQGVKSQPLDAALIINSPLDMEETS
RTLNEPQNAMYQRKMISNVIQFVTKHIDVLKNVKEIDLKEHDNDILKFMK
SLRSLQEFDVHINAPHNGFATVKDFYDAVNVFTSLRHCNIPVLCLVAEDD
PVIGSLPSNAFDDVASCNKLVAFVKFPYGGHLGFCRSPMEEWNGEPSVME
MFICDLISSHKHMEEMKEPTEGICLY


Reference
    Title: The genome sequence of Trypanosoma brucei gambiense, causative agent of chronic human african trypanosomiasis
    Jackson AP, Sanders M, Berry A, McQuillan J, Aslett MA, Quail MA, Chukualim B, Capewell P, MacLeod A and Hertz-Fowler C <4 more author(s)>
    Ref: PLoS Negl Trop Dis, 4:e658, 2010 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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