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Gene_locus Report for: wiccf-k0kqu5

Wickerhamomyces ciferrii (strain F-60-10 / ATCC 14091 / CBS 111 / JCM 3599 / NBRC 0793 / NRRL Y-1031) (Yeast) (Pichia ciferrii). Histone deacetylase 6/10

Relationship
Family|Arb2_domain
Block| X
Position in NCBI Life Tree|Wickerhamomyces ciferrii
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Fungi: N E > Dikarya: N E > Ascomycota: N E > saccharomyceta: N E > Saccharomycotina: N E > Saccharomycetes: N E > Saccharomycetales: N E > Phaffomycetaceae: N E > Wickerhamomyces: N E > Wickerhamomyces ciferrii: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CAIF01000085
1 UniProt : K0KQU5
1 UniProt : K0KQU5
1 Interpro : K0KQU5
1 Pfam : K0KQU5
1 PIRSF : K0KQU5
1 SUPERFAM : K0KQU5
Sequence
Peptide
Graphical view for this peptide sequence: wiccf-k0kqu5
Colored MSA for Arb2_domain (raw) 
LQEAVRNQQANNLLTKHNFVSLPVLNDKQDSVSASDDQILASPDIYDSET
IIIAVHDPAEIWAKTDPLTGLINPSSSVIVDSTLKLIEWSRQQNYGFIDV
NIPETSSKDDAYNPLNASQEIVLYLWDNYIQYFKASKIIFFGFGEAYSGI
VHLLGHREVRNVVKATIAYLDRKTLRPIVPLVDEAMTDWFFKNSLIFTSK
NHSCWGPDGSETKKPRKKFGRVLKSDTDGLDNIVEERFEEGTDFVLDSIE
EFDDSSS
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA
LQEAVRNQQANNLLTKHNFVSLPVLNDKQDSVSASDDQILASPDIYDSET
IIIAVHDPAEIWAKTDPLTGLINPSSSVIVDSTLKLIEWSRQQNYGFIDV
NIPETSSKDDAYNPLNASQEIVLYLWDNYIQYFKASKIIFFGFGEAYSGI
VHLLGHREVRNVVKATIAYLDRKTLRPIVPLVDEAMTDWFFKNSLIFTSK
NHSCWGPDGSETKKPRKKFGRVLKSDTDGLDNIVEERFEEGTDFVLDSIE
EFDDSSS

Reference
    Title: Draft genome sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10
    Schneider J, Andrea H, Blom J, Jaenicke S, Ruckert C, Schorsch C, Szczepanowski R, Farwick M, Goesmann A and Brinkrolf K <4 more author(s)>
    Ref: Eukaryot Cell, 11:1582, 2012 : PubMed

            


Other Papers

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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