Gene_Locus Report

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Gene_locus Report for: xanax-XAC0628

Xanthomonas axonopodis, Xanthomonas campestris, Xanthomonas oryzae, Xanthomonas fuscans, Xanthomonas vesicatoria, Xanthomonas perforans, Xanthomonas gardneri, prolyl oligopeptidase

Comment
Other strains: Xanthomonas axonopodis pv. citri (strain 306), Xanthomonas campestris pv. campestris (strains 8004; B100; ATCC 33913 / NCPPB 528 / LMG 568), pv. vesicatoria (strain 85-10), Xanthomonas oryzae pv. oryzae (strains KACC10331 / KXO85; MAFF 311018; PXO99A), Xanthomonas fuscans subsp. aurantifolii (strains: ICPB 10535; ICPB 11122), Xanthomonas vesicatoria ATCC 35937, Xanthomonas perforans 91-118, Xanthomonas gardneri ATCC 19865


Relationship
Family|S9N_PPCE_Peptidase_S9
Block| X
Position in NCBI Life Tree|Xanthomonas axonopodis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Xanthomonadales: N E > Xanthomonadaceae: N E > Xanthomonas: N E > Xanthomonas axonopodis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: xanax-XAC0628
Colored MSA for S9N_PPCE_Peptidase_S9 (raw)
MPKFASICLVAGLITAGAVSAEEPPVSNDPYAWLEDVTGAKPLDWVKTQN
AKTEARLASTQAFKQMETSIREVLDSDAKIPGVQKIGAFYYNFWKDKQHE
RGLWRRTTLDEYRKATPKWETVLDLDVLNKAEGENWVWHGADCLRPDYQR
CLIALSRGGADADVTREFDLGSKQWVKDGFFRPESKGGLGWIDRDTVYVF
TDFGAGSMTSSGYPRIAKQWKRGTPLTAATVVYEGKPTDMYIAAMHDDTP
GFERDFVSRTLAFYNDELYLKGADGTLVKVDVPNSASKSVKRQWLTLELR
EPWTVGGKTYKPGTLLATRFDDFMAGKRNFDVLFEPTDTTSLAGMAWTKS
HLVLNVLEDVKNRLSVTTPSPDGWKKSAFVGAPSFGTVDVGAVDSDDSDA
LWLTVTDYLTPTTLSWVDVGAAPQPLKTMPAFFDAGKDTIEQHFATSKDG
TRVPYFLVRPKALKLDGSAPTLLYGYGGFEISMTPNYSGGLGRAWLEKGG
VYVVANIRGGGEYGPRWHQAALKQNRHKAYEDMAAVAKDLVARKITSTKH
LGVQGGSNGGLMTGNMLTQYPELFGAVVVQVPLLDMKRYSHLLAGASWMA
EYGNPDTDDWTFIQTFSPYHLFDAKKTYPPVIFLTSTRDDRVHPGHARKM
AAKMIEAGKDVTYYENIEGGHGGAANNAQAAHMAALAYSFLWERLAD
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPKFASICLVAGLITAGAVSAEEPPVSNDPYAWLEDVTGAKPLDWVKTQN
AKTEARLASTQAFKQMETSIREVLDSDAKIPGVQKIGAFYYNFWKDKQHE
RGLWRRTTLDEYRKATPKWETVLDLDVLNKAEGENWVWHGADCLRPDYQR
CLIALSRGGADADVTREFDLGSKQWVKDGFFRPESKGGLGWIDRDTVYVF
TDFGAGSMTSSGYPRIAKQWKRGTPLTAATVVYEGKPTDMYIAAMHDDTP
GFERDFVSRTLAFYNDELYLKGADGTLVKVDVPNSASKSVKRQWLTLELR
EPWTVGGKTYKPGTLLATRFDDFMAGKRNFDVLFEPTDTTSLAGMAWTKS
HLVLNVLEDVKNRLSVTTPSPDGWKKSAFVGAPSFGTVDVGAVDSDDSDA
LWLTVTDYLTPTTLSWVDVGAAPQPLKTMPAFFDAGKDTIEQHFATSKDG
TRVPYFLVRPKALKLDGSAPTLLYGYGGFEISMTPNYSGGLGRAWLEKGG
VYVVANIRGGGEYGPRWHQAALKQNRHKAYEDMAAVAKDLVARKITSTKH
LGVQGGSNGGLMTGNMLTQYPELFGAVVVQVPLLDMKRYSHLLAGASWMA
EYGNPDTDDWTFIQTFSPYHLFDAKKTYPPVIFLTSTRDDRVHPGHARKM
AAKMIEAGKDVTYYENIEGGHGGAANNAQAAHMAALAYSFLWERLAD


References
6 more
    Title: Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris
    Qian W, Jia Y, Ren SX, He YQ, Feng JX, Lu LF, Sun Q, Ying G, Tang DJ and He C <18 more author(s)>
    Ref: Genome Res, 15:757, 2005 : PubMed

            

    Title: Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence
    Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Buttner D, Caldana C, Gaigalat L, Goesmann A and Kaiser O <19 more author(s)>
    Ref: Journal of Bacteriology, 187:7254, 2005 : PubMed

            

    Title: Comparison of the genomes of two Xanthomonas pathogens with differing host specificities
    da Silva ACR, Ferro JA, Reinach FC, Farah CS, Furlan LR, Quaggio RB, Monteiro-Vitorello CB, Van Sluys MA, Almeida Jr NF and Kitajima JP <55 more author(s)>
    Ref: Nature, 417:459, 2002 : PubMed

            


Other Papers


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Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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