Gene_Locus Report

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Gene_locus Report for: xanc5-q3btn4

Xanthomonas campestris pv. vesicatoria (strain 85-10) Putative secreted protein

Relationship
Family|6_AlphaBeta_hydrolase
Block| X
Position in NCBI Life Tree|Xanthomonas campestris pv. vesicatoria
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Xanthomonadales: N E > Xanthomonadaceae: N E > Xanthomonas: N E > Xanthomonas euvesicatoria: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AM039952
1 UniProt : Q3BTN4
1 UniProt : Q3BTN4
1 Interpro : Q3BTN4
1 Pfam : Q3BTN4
1 PIRSF : Q3BTN4
1 SUPERFAM : Q3BTN4
Sequence
Graphical view for this peptide sequence: xanc5-q3btn4
Colored MSA for 6_AlphaBeta_hydrolase (raw)
MRFPFPLLLTATMAAATMSAAQGAAPTEALPADAARNVVLVHGAFADGSG
WRNVYERLVKRDYRVTIVQNPLTSLADDVAATRRALDQQDGPTVLVGHSW
GGTVISEAGVHDKVIGLVYVSALAPDAGETTAQLYQGFAPTPEFVIDTRP
DGFGFVRPANFKAGFANDVSDADAAFMAASQVPIKMSAFGERLHHAAWKS
KPSWAVIATEDKAFDQAMLLHMAKRIGADITTVPGSHALFITQAQTVSEV
IDRAARGAATKAKSTSKAKSSAKTG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MRFPFPLLLTATMAAATMSAAQGAAPTEALPADAARNVVLVHGAFADGSG
WRNVYERLVKRDYRVTIVQNPLTSLADDVAATRRALDQQDGPTVLVGHSW
GGTVISEAGVHDKVIGLVYVSALAPDAGETTAQLYQGFAPTPEFVIDTRP
DGFGFVRPANFKAGFANDVSDADAAFMAASQVPIKMSAFGERLHHAAWKS
KPSWAVIATEDKAFDQAMLLHMAKRIGADITTVPGSHALFITQAQTVSEV
IDRAARGAATKAKSTSKAKSSAKTG


Reference
    Title: Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence
    Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Buttner D, Caldana C, Gaigalat L, Goesmann A and Kaiser O <19 more author(s)>
    Ref: Journal of Bacteriology, 187:7254, 2005 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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