Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: xanc5-q3byx0

Xanthomonas campestris pv. vesicatoria (strain 85-10) putative hydrolase of the alpha/beta fold superfamily

Relationship
Family|6_AlphaBeta_hydrolase
Block| X
Position in NCBI Life Tree|Xanthomonas campestris pv. vesicatoria
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Xanthomonadales: N E > Xanthomonadaceae: N E > Xanthomonas: N E > Xanthomonas euvesicatoria: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AM039952
1 UniProt : Q3BYX0
1 UniProt : Q3BYX0
1 Interpro : Q3BYX0
1 Pfam : Q3BYX0
1 PIRSF : Q3BYX0
1 SUPERFAM : Q3BYX0
Sequence
Graphical view for this peptide sequence: xanc5-q3byx0
Colored MSA for 6_AlphaBeta_hydrolase (raw)
MSHDSTQRIRYRTQQVGDVQVFYREAGRKDAPVLLLLHGFPSASHMFRDL
MPLLASQYRLIAPDLPGFGMTKAPPRGQFDYTFEALYKVIEGFTDALGLT
RYGLYLFDYGAPVGFRLAAAHPERVSAIISQNGNAYLEGFSDQWDAWQAY
WREPSAANREACRASLSPQTIREWQYGTGVAPGALSPDGYMLDIAYMARP
GAEEIQLDLILDYRSNVAAYPAFQAYFRTHQPPLLAVWGKHDPAFIPAGA
QAYRKDLPKAEVHLLDTGHFALETHAVEIAHSISEFLSRTLAPSV
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSHDSTQRIRYRTQQVGDVQVFYREAGRKDAPVLLLLHGFPSASHMFRDL
MPLLASQYRLIAPDLPGFGMTKAPPRGQFDYTFEALYKVIEGFTDALGLT
RYGLYLFDYGAPVGFRLAAAHPERVSAIISQNGNAYLEGFSDQWDAWQAY
WREPSAANREACRASLSPQTIREWQYGTGVAPGALSPDGYMLDIAYMARP
GAEEIQLDLILDYRSNVAAYPAFQAYFRTHQPPLLAVWGKHDPAFIPAGA
QAYRKDLPKAEVHLLDTGHFALETHAVEIAHSISEFLSRTLAPSV


Reference
    Title: Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence
    Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Buttner D, Caldana C, Gaigalat L, Goesmann A and Kaiser O <19 more author(s)>
    Ref: Journal of Bacteriology, 187:7254, 2005 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer