Gene_Locus Report

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Gene_locus Report for: xanca-XCC0266

Xanthomonas campestris, Xanthomonas vesicatoria, lipase

Comment
Other strains: Xanthomonas campestris pv. campestris (strains ATCC 33913 / NCPPB 528 / LMG 568; 8004; B100), Xanthomonas vesicatoria ATCC 35937 sequence used is F0B985


Relationship
Family|Hormone-sensitive_lipase_like
Block| H
Position in NCBI Life Tree|Xanthomonas campestris
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Xanthomonadales: N E > Xanthomonadaceae: N E > Xanthomonas: N E > Xanthomonas campestris: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AE012122, CP000050
3 UniProt : Q8PDR9, F0B985, B0RM32
3 UniProt : Q8PDR9, F0B985, B0RM32
3 Interpro : Q8PDR9, F0B985, B0RM32
3 Pfam : Q8PDR9, F0B985, B0RM32
3 PIRSF : Q8PDR9, F0B985, B0RM32
3 SUPERFAM : Q8PDR9, F0B985, B0RM32
Sequence
Graphical view for this peptide sequence: xanca-XCC0266
Colored MSA for Hormone-sensitive_lipase_like (raw)
MEQLTPQQARKILVDAQAGATLPAAEVTRKTITVDGKPLGLVVVKPPGSA
GKTLPAFMFFHGGGWVLGDFPTHERLIRDLARASGAAAVYVDYSPSPEAR
YPVAIHQAYAATKWVAEHGAELGVDGTRLAVVGNSVGGNMATSVALQAKA
AGTPSIRYQVLLWPVTDAAFDNGSYQQYQQGYFLSRNMMRWFWDSYTTDP
KQRREIYASPLQASVQQLKGLPPTLIQTAELDVLRDEGEAYGRKLDQAGV
DVTVTRYNGLIHDYGLLNALSDVPAVRTAIRQAGDELQQHLAK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MEQLTPQQARKILVDAQAGATLPAAEVTRKTITVDGKPLGLVVVKPPGSA
GKTLPAFMFFHGGGWVLGDFPTHERLIRDLARASGAAAVYVDYSPSPEAR
YPVAIHQAYAATKWVAEHGAELGVDGTRLAVVGNSVGGNMATSVALQAKA
AGTPSIRYQVLLWPVTDAAFDNGSYQQYQQGYFLSRNMMRWFWDSYTTDP
KQRREIYASPLQASVQQLKGLPPTLIQTAELDVLRDEGEAYGRKLDQAGV
DVTVTRYNGLIHDYGLLNALSDVPAVRTAIRQAGDELQQHLAK


References
1 more
    Title: Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper
    Potnis N, Krasileva K, Chow V, Almeida NF, Patil PB, Ryan RP, Sharlach M, Behlau F, Dow JM and Jones JB <8 more author(s)>
    Ref: BMC Genomics, 12:146, 2011 : PubMed

            

    Title: Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris
    Qian W, Jia Y, Ren SX, He YQ, Feng JX, Lu LF, Sun Q, Ying G, Tang DJ and He C <18 more author(s)>
    Ref: Genome Res, 15:757, 2005 : PubMed

            

    Title: Comparison of the genomes of two Xanthomonas pathogens with differing host specificities
    da Silva ACR, Ferro JA, Reinach FC, Farah CS, Furlan LR, Quaggio RB, Monteiro-Vitorello CB, Van Sluys MA, Almeida Jr NF and Kitajima JP <55 more author(s)>
    Ref: Nature, 417:459, 2002 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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