Gene_Locus Report

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Gene_locus Report for: xanca-estA1

Xanthomonas campestris estA1

Comment
Other strains: Xanthomonas campestris (pv. vesicatoria (strain 85-10); pv. campestris (strains B100; ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25); pv. raphani 756C) pv. campestris str. ATCC 33913 strain 8004


Relationship
Family|Carb_B_Bacteria
Block| C
Position in NCBI Life Tree|Xanthomonas campestris
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Xanthomonadales: N E > Xanthomonadaceae: N E > Xanthomonas: N E > Xanthomonas campestris: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 5 more: NC_003902, CP000050, AM039952
>3 UniProt links 1 more: Q3BZD8, B0RLC2, G0C9Y2
1 Ncbi-nid : 21229478
1 Ncbi-pid : 21229621
>3 UniProt links 2 more: Q3BZD8, B0RLC2, G0C9Y2
>3 Interpro links 2 more: Q3BZD8, B0RLC2, G0C9Y2
>3 Prodom links 2 more: Q3BZD8, B0RLC2, G0C9Y2
>3 Pfam links 2 more: Q3BZD8, B0RLC2, G0C9Y2
>3 PIRSF links 2 more: Q3BZD8, B0RLC2, G0C9Y2
>3 SUPERFAM links 2 more: Q3BZD8, B0RLC2, G0C9Y2
Sequence
Graphical view for this peptide sequence: xanca-estA1
Colored MSA for Carb_B_Bacteria (raw)
MRSGQVRGVRSQGICVFKGIPYGGDTGPRRFQAPVLETPWDGIRDASAYS
AAAPQPKASEPTSEDCLFLNVWTPALRDGGKRPILVYIHGGGYTTGSGSD
PLYDGTRLCTRGDVVVITVNHRLNVFGYLYLAQLGDATFADSGNAGQLDL
IQALQWVRAHAAEFGGDAGNVTVFGQSGGGAKIATLMAMPAARGLFHRAW
TMSGQQVTAAGPRAATQRAQLLLDALKLSPDTLARIRTLPAAQLLAAAQV
RDPSRVENSALYLGPVLDARALPVHPFWPTAPVQSARIPMVIGNTRDETR
AFLGNDAGNFALTWDTLPAKLEAQQYVDLLPQVVIAHYRRLYPHYTPSQV
FFAATTAGRSWRGAIEEAEARARQGAPTWAYQLDWGSPLDGGKFGAFHTL
DIPLVFDTITQPGSRTGDSPAAQQMADQMSTALLAFARHGDPNHRSLPRW
KQYSLERRETLLFDVPSQLANDPRGGERQLYQQAPFIQRGTF
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MRSGQVRGVRSQGICVFKGIPYGGDTGPRRFQAPVLETPWDGIRDASAYS
AAAPQPKASEPTSEDCLFLNVWTPALRDGGKRPILVYIHGGGYTTGSGSD
PLYDGTRLCTRGDVVVITVNHRLNVFGYLYLAQLGDATFADSGNAGQLDL
IQALQWVRAHAAEFGGDAGNVTVFGQSGGGAKIATLMAMPAARGLFHRAW
TMSGQQVTAAGPRAATQRAQLLLDALKLSPDTLARIRTLPAAQLLAAAQV
RDPSRVENSALYLGPVLDARALPVHPFWPTAPVQSARIPMVIGNTRDETR
AFLGNDAGNFALTWDTLPAKLEAQQYVDLLPQVVIAHYRRLYPHYTPSQV
FFAATTAGRSWRGAIEEAEARARQGAPTWAYQLDWGSPLDGGKFGAFHTL
DIPLVFDTITQPGSRTGDSPAAQQMADQMSTALLAFARHGDPNHRSLPRW
KQYSLERRETLLFDVPSQLANDPRGGERQLYQQAPFIQRGTF


References
2 more
    Title: Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris
    Qian W, Jia Y, Ren SX, He YQ, Feng JX, Lu LF, Sun Q, Ying G, Tang DJ and He C <18 more author(s)>
    Ref: Genome Res, 15:757, 2005 : PubMed

            

    Title: Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence
    Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Buttner D, Caldana C, Gaigalat L, Goesmann A and Kaiser O <19 more author(s)>
    Ref: Journal of Bacteriology, 187:7254, 2005 : PubMed

            

    Title: Comparison of the genomes of two Xanthomonas pathogens with differing host specificities
    da Silva ACR, Ferro JA, Reinach FC, Farah CS, Furlan LR, Quaggio RB, Monteiro-Vitorello CB, Van Sluys MA, Almeida Jr NF and Kitajima JP <55 more author(s)>
    Ref: Nature, 417:459, 2002 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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