Gene_Locus Report

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Gene_locus Report for: yerin-c4t2b5

Yersinia intermedia; Yersinia frederiksenii, Alpha/beta superfamily hydrolase

Comment
Other strains: Yersinia intermedia (ATCC 29909); Yersinia frederiksenii


Relationship
Family|Abhydrolase_7
Block| X
Position in NCBI Life Tree|Yersinia intermedia ATCC 29909
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Enterobacterales: N E > Yersiniaceae: N E > Yersinia: N E > Yersinia intermedia: N E > Yersinia intermedia ATCC 29909: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : AALF02000014, WP_050073226, WP_050085767
1 UniProt : A0A0T9M1U2
1 Interpro : A0A0T9M1U2
1 Pfam : A0A0T9M1U2
1 PIRSF : A0A0T9M1U2
1 SUPERFAM : A0A0T9M1U2
Sequence
Graphical view for this peptide sequence: yerin-c4t2b5
Colored MSA for Abhydrolase_7 (raw)
MNAGLFVCSLALSAILTAATVQASPVTYQKEAITENNLPVFYPQLKKQMT
YQSSWLAGRYTDFALWKSDTRKIFRQALLTPDSTIAFSAEKIDQQDRGRY
IAEKIALNITDESRVQGLLLTPKSKGPHPAIVLLHDHGSKFDIGKEKMIR
PWGDSAQLASAQAWSDKFFSGKFIGDELAKRGYVVLSIDAIGWGDRGPIS
YEQQQALASNFFNLGRSLAGTMAYEDIRTVDFLATLPSVDRQRIGALGFS
MGAYRAWQLAALSDKVAATAAISWFGNYQGLMTPGNNVLRGQSAFYMLHP
GIANKLDFPDIASLAAPKPMLLFNGGKDKLFPSDAVEQAYSKVHAIWRSQ
NAESRLLTRSWPTLGHVFYQEQQDVVFPWLDRWLKP
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MNAGLFVCSLALSAILTAATVQASPVTYQKEAITENNLPVFYPQLKKQMT
YQSSWLAGRYTDFALWKSDTRKIFRQALLTPDSTIAFSAEKIDQQDRGRY
IAEKIALNITDESRVQGLLLTPKSKGPHPAIVLLHDHGSKFDIGKEKMIR
PWGDSAQLASAQAWSDKFFSGKFIGDELAKRGYVVLSIDAIGWGDRGPIS
YEQQQALASNFFNLGRSLAGTMAYEDIRTVDFLATLPSVDRQRIGALGFS
MGAYRAWQLAALSDKVAATAAISWFGNYQGLMTPGNNVLRGQSAFYMLHP
GIANKLDFPDIASLAAPKPMLLFNGGKDKLFPSDAVEQAYSKVHAIWRSQ
NAESRLLTRSWPTLGHVFYQEQQDVVFPWLDRWLKP



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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